Pseudomonas fitomaticsae: KJY40_05765
Help
Entry
KJY40_05765 CDS
T08740
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJY40_05765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfit03021
]
KJY40_05765
Transcription machinery [BR:
pfit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJY40_05765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_24
GerE
HTH_5
HTH_10
HTH_28
HTH_7
Trp_repressor
HTH_40
TnsD
HTH_DeoR
HTH_36
HTH_11
HTH_38
HTH_IclR
HTH_Tnp_ISL3
DUF1492
Motif
Other DBs
NCBI-ProteinID:
UFQ01195
LinkDB
All DBs
Position
complement(1313008..1313496)
Genome browser
AA seq
162 aa
AA seq
DB search
MSSAHPVESLYQAHHSWLTGWLRRKLGCPDSAADLAQDTFIRVLTAREPPVIIEPRAFLT
TLAKRVLFNHYRRQDLERAYLDTLAQMPEMVAPSEEEKAIILQTLMELDQLLDGLPRAVK
RAFLLAQVDGLTYLQIAAELGISVATVKRHLNKAAMRCYFAL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtccgcccatcctgtcgaatcgctctaccaggcccaccacagctggctcaccggc
tggctgcggcgcaaactcggctgccccgacagcgccgccgatctcgctcaggacaccttc
atccgggtgctgaccgcccgcgagcctccggtgatcatcgaaccgcgcgcatttctcacc
accctggccaagcgcgtgctgttcaatcattaccgccgccaggatctggaacgcgcctac
ctcgacaccctcgcgcagatgccggaaatggttgcgccttcggaagaagaaaaagccatc
atcctgcaaaccctgatggagctggatcagttgctcgacggtctgccgcgcgcagtcaaa
cgtgcatttctgctggcgcaggtcgatggcctgacctatctgcagatcgccgctgaactg
ggcatttccgtggccacggtcaaacgtcacttgaacaaagcggcgatgcgctgctacttc
gccctgtga
DBGET
integrated database retrieval system
