Pseudomonas fitomaticsae: KJY40_16300
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Entry
KJY40_16300 CDS
T08740
Name
(GenBank) leucine-rich repeat domain-containing protein
Organism
pfit
Pseudomonas fitomaticsae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6543
NEL
LRR_4
LRR_1
LRR_8
PaaX
Motif
Other DBs
NCBI-ProteinID:
UFP97629
LinkDB
All DBs
Position
complement(3658559..3663442)
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AA seq
1627 aa
AA seq
DB search
MDVKKSNSNTPVMTPAQQGVFFDLYKKQIPNWLLESSETARNDLYESFKKSFKSRQAARE
QLRALKSPQSFCTPLLAKAMAEKLGEPFEVEGAIFQHVRSASSLLGLYRKLVLPINRDLL
TAACENFELSETLASTYHESSLLYIPERITGRNNKVLSIQPHEFARLCRYLDLGKQYQKH
IEGFFGGDSQIASLQESAIAYSRDQFDVERHIAYMRGHISSDVHQMLGSVRNSNPAIKLG
KNTLGYQSLEMLGVQLKGPMFIGPVSEHADDDYRCVIYMPGDPDHPLKEYPSFQKFELEL
SGRLRNSQFRSFFMRFIPMKDRSVFLTGLDVRLLKARPNQFPFSATFLPLTGVDLQGDAR
DNLFLAMFQHRAEQVRADTRLLAVPTDDEDEKTRLARQDSYKAIGLNTLLFFASFVPVLG
EVICAVAGIQLLGQIYEGIDSWAHGDQEHATDCLFDTLENLVLMAGFAAGGLAVGKAYKV
VRSSSFIQGLRRVQVGPMSYRLWNPDMKAYRQRESLPRSFAADAQGLVWRADNRYLPLGP
DAYAVRPVTGTSLWEVHDPHLPGRYSPLLETNGAGAWRHDSELPHEWSSLTLFRRLGFRE
ERISDIRALQVIAASGVSQAAMRKLFVQRSKPMAMLTDSVRRFRADSDVSEFMAQIDTPA
SASLADADLQLYSLTSAGRWPRDMGILVKDITGNEVARYGADKTERQVSISEDALRNGQF
YTPLLAALNDSERTHLLGSATVESKNQIALLGKHIAGLAPRMRMAMLERLFRRTDVCELS
AGETIIKAFPGLSASVADELVQHADAREWAQLGSDTVPLRLAEEARRYQQVQRLNRAYEG
LYLDAASGRDADMLVLDTLRHLPGWPDDVFVEILDWGVYADQRAVIGPSDAPHKVLVEAY
AERYQVQDPGNNNVSSHPARTRANFFQALWESLPTHSRKAIGVDAQVDGTGLRQKITALA
LQRREAFARVLEITPVRSSYRSPMGLADPRIEQVTVEQSAPSSHSPGISPAPTLVRRAQE
LYPSQSTAQIKRFVTSLGTDEVLAIRSLERLHEQYRTMVETLERWTHRNTYYQDEEGPRL
KVPVHSKARAMQAILRAWRKETRDASHSGHPTYSLTLDPVPLGEMPTLIGDFAHITALEM
SGVGASAGLNRFLHNFPGLRVLNLSGNGLTRIPLAIGDMPGLTGLDLSNNRIRLTGQTIV
ELASKQHLRTLDMGFNPLLGRTPDIRALRNLRHLNLRNTGISEWPATDALAHLETLDLRN
NQIVDIPPSVFNSRAVLNRGTAIDGNPLSTESLQAIAAYQQSQGISLGVITTEYACAARL
AGGREGTAWLNGLPTVEVERAKQVLLSLSADPDSRDFFEVLMQLRETSDFARTREQLGQR
VWNVLEAACEDDSLRRALFRMARAGWLSAPNVAGLFSDLEVRVLCYRAAAAARTGTQTLE
GDLVRLLRGLFRLQQVEKQALIDSARRSRAGTFTQRQALDISLVYRVRLAQRLALPAQPT
ELNMPLDVEVTDAQIDHAYLEVVRAEQTTQLSEWVNSQEFWNEYLLTTRQDAFTGVFDRS
AQAFARLEAQVGLSREAASQQMTTILDNFRNESLELRKQLTIAALARHPGLSLPVTPESN
ELVKTQG
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaaaaaagtaattcgaatacgcctgtcatgacgcccgctcaacagggcgtt
ttttttgacctgtataaaaagcagatccccaactggttgcttgagtcttcggaaactgct
cgaaacgatctctatgaaagtttcaagaaaagtttcaaatcccgtcaggccgcgcgggaa
caattgcgcgcactgaaatcccctcagagtttttgcacgccactgctggccaaggccatg
gctgagaaactgggcgaaccgtttgaggtcgaaggggcgatatttcagcatgtccgctct
gcgtcgagcctcttggggctgtatagaaaactggtgctgcccatcaatcgcgacttgttg
accgcggcttgcgagaatttcgaattgtcggaaaccctggccagcacgtatcacgagagt
tccttgctgtacatcccggagcgaataaccggacggaacaataaggtattgtcgatacag
cctcacgaatttgccagactttgccggtatctggatctgggcaagcaataccagaaacat
attgaggggttcttcggcggcgacagtcaaatcgcaagtttgcaggagtccgctattgca
tattccagggatcagtttgatgtcgaacggcacatcgcttatatgcgcgggcatatcagt
tccgatgttcaccagatgcttggatcggtgaggaactcgaatcctgcaatcaagctgggc
aagaacaccctgggttatcaaagccttgaaatgctcggagtacagctcaaaggcccgatg
ttcatcggtccggtcagcgaacatgcggatgacgattaccgttgtgtcatctatatgcct
ggcgatcccgatcatcctctcaaggagtaccccagtttccagaagttcgagctcgagttg
agcgggcgtttacgcaactcgcagtttcgcagttttttcatgcgcttcatcccgatgaag
gatcgctcggttttcctcacgggactcgacgtacgtctgttgaaagcccgaccgaaccag
ttccccttttccgcgacctttcttccgctgactggggtcgatctccagggggacgcaaga
gataacctgtttctcgcgatgttccagcaccgcgcggagcaggttcgggccgatactcgc
ctgctggcggtgccgacggatgatgaagatgagaaaacccgccttgccaggcaggactcc
tataaagccatcgggctgaatacgctgttgttctttgcgtccttcgtgccggttctcggt
gaggtcatttgtgccgtcgccgggatccagttgctcggtcagatctacgaaggcatcgac
agttgggcccacggtgaccaggaacatgccaccgattgtctgttcgatacgcttgaaaac
ctggtcctcatggcgggttttgccgcaggcggtcttgctgtcggcaaagcctacaaagtc
gtgcgttcgtcgagtttcatccagggacttcggcgcgttcaggtcggcccaatgtcttat
cgcctgtggaatccggacatgaaggcttaccgtcagcgcgagtcattgccgcgtagtttt
gctgcggatgcgcaagggctggtatggcgtgcagacaaccgctatttgccactgggtccc
gacgcgtatgcggtgcgtccggtgaccggcaccagtttgtgggaggtccatgacccgcac
ttgcccgggcgttattcaccgttgcttgagaccaatggagctggcgcctggcgtcatgac
tccgagctgccccatgagtggagttcattgactctgttccgtcgtctgggttttcgcgag
gaaaggatttcggacatccgtgccctgcaagtcattgctgccagcggagtcagccaggcg
gccatgcgcaagttatttgtccaacgcagcaagccaatggcgatgctcacagactcggtc
agacggtttcgtgcagattccgacgtcagtgagttcatggcgcaaattgacacgcccgcg
tctgcttcattggcggatgccgatctgcaactttattcgctgacatcggcaggtcgctgg
ccacgggatatgggcatccttgtgaaggacattactggtaacgaagtggcccgctatggc
gcagacaagactgaacgccaggtgagcatcagtgaggatgcactgcgcaacggtcagttt
tatacgcctcttcttgcggcactcaacgacagtgagcgcacacacttgctgggttcggcc
actgtggagtcgaaaaaccagatagcgttattgggtaaacatattgccgggctggcgccg
cggatgcgcatggcgatgttggagcggttgttccggcgaaccgatgtctgcgagctttcc
gcaggcgagacgatcatcaaggcgtttccagggctttcagccagtgttgccgacgaactg
gtgcaacatgccgatgcgcgtgagtgggcgcagcttggatccgacaccgtaccgttgcgt
ctggccgaggaggccaggcgctatcagcaggtgcagcgactaaaccgcgcgtacgagggg
ttatacctggacgccgccagcgggcgcgatgcagacatgctggtgctcgataccctgagg
cacttgccgggctggcctgatgatgtatttgtcgaaattctggattggggagtgtacgcc
gatcagcgggccgtcattggcccgagcgatgccccacacaaagtgcttgtcgaagcctat
gccgagcgctatcaggtccaggatccgggtaacaataacgtgtccagtcatccggcacgc
acccgggcgaattttttccaggcgctgtgggaaagccttccaacccacagtcgcaaggcc
atcggcgttgacgcgcaagttgacggcacgggcttgcgacagaaaatcactgcattggcg
ctgcagcggcgcgaagccttcgccagggtgctggaaattacaccggtgcgatcgagttat
cgttcacccatggggctggcagatccccggatcgaacaggtcactgtcgagcaatcggca
ccttcaagccattctcctggcatttcccccgcgcccacgctcgtgcgtcgggcgcaggag
ttgtacccgagccaatcaaccgcacagatcaaacgtttcgtgacctcactgggcaccgat
gaagtactggccatcagatcgcttgagcggttgcacgagcaataccgaacgatggtggaa
accctggagcgctggactcatcgcaatacgtactatcaggatgaagaagggcccaggctc
aaggtgccagtccacagcaaagcccgggcaatgcaagccattttgcgcgcgtggcgcaag
gaaacccgagacgcgtcgcattcggggcatccgacctacagtctgacgctcgatccggtg
ccgttaggggagatgccgacccttatcggtgactttgcccacatcaccgcgctggaaatg
agcggcgtgggcgccagtgcaggtttgaacaggtttctgcacaactttcccggattgcgg
gtgctgaatctttcggggaacggactgacacgcatccctctcgcgatcggggacatgccg
gggctgacggggctggacttgagcaacaaccgcatccggcttaccgggcagacgattgtg
gagctggccagcaagcagcacctgcgtacgctggatatgggtttcaacccgctcctgggg
cgcactccggatatcagggcgctgcgcaatctgcgtcacctgaacctgcgcaacaccggc
attagcgaatggcccgcaaccgatgcgcttgcgcatctggaaacactcgatctgcgcaac
aaccagatcgtcgatatcccgccgtcagtgttcaactctcgcgctgtactgaaccggggt
accgccatcgacggcaatccgctgtcgacagagagtttgcaagccatcgcggcgtaccag
cagtcacaaggtatcagtctgggcgttatcaccaccgagtacgcctgcgccgcgcggttg
gccggaggtcgggaagggaccgcgtggctaaatggcttgccgacggtggaggttgagcgg
gcgaagcaagtactgttgtcactgtcggctgatccggactctcgggatttttttgaagtg
ctcatgcaactgcgtgaaacctccgattttgcccgaacccgcgaacagctgggccagcgt
gtgtggaatgtactggaggctgcctgcgaggacgactcgttacgtcgtgcgctgtttcgc
atggcccgcgcaggctggctcagtgcgcccaacgttgctggactgttcagcgatctggaa
gtcagagttctgtgttatcgggcagcggcagcggcccgcaccggcacgcagactctggaa
ggcgatctggttcgcctgttgcgcgggctgtttcgtctgcagcaggtggaaaaacaggcg
ttgatcgatagtgcgcggcgttcccgcgcaggcaccttcacccagcgtcaggcgctggac
atcagccttgtttaccgggtacgactggcgcagcgactggcgttgcctgcacaacccacg
gagctgaatatgccactggatgtcgaggtgaccgatgcgcagatcgatcacgcgtatctg
gaggtcgtcagggccgagcagacgacgcaactctctgagtgggtcaacagccaggaattc
tggaacgagtatttgctgacgacgcgtcaggacgcatttaccggtgtgttcgatcgcagc
gctcaagcgtttgcgcgactggaagcgcaagtcggactgtctcgtgaagccgccagtcaa
caaatgacgacgattttagacaacttcagaaatgaaagcctggagctgcgtaaacagttg
accattgcggcgctggcgaggcatccgggtctgagcttgccggtcacgccggaatcgaac
gaattggtaaaaacgcagggataa
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