Pseudocercospora fijiensis: MYCFIDRAFT_114276
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Entry
MYCFIDRAFT_114276 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_114276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_114276
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCFIDRAFT_114276
Spliceosome [BR:
pfj03041
]
Complex A
U2 snRNP components
U2 related factors
MYCFIDRAFT_114276
Complex B
MYCFIDRAFT_114276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19330249
NCBI-ProteinID:
XP_007921737
JGI:
114276
UniProt:
N1Q7W9
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
RAVRTIDNRPHNMARSPARRRDDRDTRRDRDREYDRSYHRRSRSRDVRGRGTYHSDRSLI
DRQTQRRDDRPRGASRDYSRDHRDRGYERDRSRDYGRGRREPRSPEDEAEKRAKAERLAK
VEAWKAKKAQEKAKFEAGKAASASASALTPTAASPSNSQTTTAVGSPAPAPTFEDTPATT
RAKFDPKAIKKQTEGKLKPEQATLGGDAAVPAIANGNANDLNTVAQTGNVPKGEGNITGF
GLNKSASEKTGDKTATAKSAALDDEDDVQRKFKKLPDLVLESTTSDVADPNGEDDQDDDM
EDLRSDEEEAEAARQAAQKRAEEAQEDQDATMPDAEPSVPATTSAAVADTAMEVDEDVDP
LDAFMNNLEEVPERRPQPSAAKRGTREPRLFDEDDGPDLDAVGDNPEDLLNPARRKKKEI
PAVDHSKIDYESFRKNFYNESIEVSEMTEDDVTTLRAELDNITVRGVDPPKPITKWSQAG
FGAQVLDVIRENKFESPTSIQCQALPAIMSGRDTIGIAKTGSGKTLAFILPMFRHIKDQR
PVANLEGPVGIIMAPTRELAVQIHRECKPYLKALGLRGVCAYGGAPIKDQIAELKRGAEV
VVCTPGRMIDLLAANQGRVTNLRRVTYVVMDEADRMFDMGFEPQITRILGNIRPDRQTVL
FSATFPKKMESLARKTLSKPVEIVVGGRSVVAPEITQIIEVRPEDTKFRRVLELLGNLLE
EDEDARSLVFVERQETADHIFKELGKKGYPSVSVHGGREQIDRDQAILDFKSGAIPIMVA
TSVAARGLDVKQLKLVINFDSPNHGEDYVHRAGRTGRAGNTGTAVTFVTPEQDRYAPFLV
RCLEDSKQEPPDDLKELAATHKKKVEAGEASRAGSGFGGHGIERLDAARAAERAREKSMF
KTGDEPEEENEEAKKEKDKKESEVEKLVSKAAGKVTDRDAQAEQTGQGAHLANALKVSKT
ETPAANPATISDPVARAAAAAASINSRLGTKGATRPGAPIDNRGPDAGAFHATLEINDFP
QKARWAVTNRTNVAKILEATGTSITSKGIYYPAGKEVNAGDEPKLYILVEGDTEIAVQSA
MRELSRHLTEGTLQAQDAENRSGGGGRYRVV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
cgtgcagtacggacgatcgacaaccggccgcacaatatggcccgctcaccagcgcgtagg
agagacgaccgcgacactcggcgtgaccgggatcgagaatacgatcggagctatcatcga
cgatcgcgcagcagagatgtaagaggtcgtggcacttaccacagcgacagaagtttgata
gacagacagacccagcgccgcgacgatcgccctcgtggagcaagccgagactactctcgc
gaccatcgcgaccgcggctatgaacgagatcgatcccgagactatggccgcggtcgccgc
gagcctcgctcacccgaggatgaggctgagaaaagggcgaaagcagagagactggccaag
gtcgaggcatggaaggcaaagaaagcccaagagaaggccaagttcgaagccggaaaggct
gcttctgcttctgcctctgctttaaccccaaccgctgcatcgccgtcaaactcgcagacc
actacagctgtcggctcgccagcacctgctccaacattcgaagatacacctgcgacaacg
cgggccaagttcgatcctaaggccatcaagaagcagacggaaggcaagttgaagcccgaa
caggcaacactcggcggcgatgcagccgttcctgctatcgccaatggaaacgcaaacgat
ctgaacactgtcgcgcagacaggaaatgtgccgaaaggtgagggcaacatcacgggcttc
ggcctaaacaagagcgcttccgaaaagactggcgataagactgctacagcaaagtctgct
gccctggacgacgaggatgatgtgcagcgtaaatttaagaagcttcctgaccttgtcctc
gagtctactacaagtgatgttgcggatcctaatggagaagatgaccaagacgatgacatg
gaagatcttcgaagcgacgaggaagaggctgaagccgctcgacaggcggctcaaaagcgt
gcggaagaagcgcaagaagatcaagatgccaccatgcctgatgccgaaccctcagtacca
gccacgacatctgctgctgttgctgatactgcaatggaagtagacgaggacgtcgatcca
ctggatgccttcatgaacaatctcgaggaagtcccggagaggcgaccacagccgagtgca
gccaagcgtggcacacgagagccccggctctttgatgaggatgatggcccagatcttgat
gcagtcggcgacaacccagaagatctactgaaccccgctaggcgcaagaaaaaggagatt
cctgctgtcgaccactcgaaaattgactacgaatcattccgcaagaacttttataacgaa
tcgattgaggtctcggaaatgactgaagacgatgtgacgacgctcagagctgagcttgac
aatatcaccgtcagaggtgtggatccgccgaagccaatcacgaagtggtcacaggctggt
tttggtgcccaggtgctggacgtgatccgcgagaacaaattcgagagtccaacgtccatt
cagtgtcaagctctgccggcgatcatgtctggccgtgacaccattggtattgcgaagact
ggctcaggcaagactctggcattcattctacccatgttccgtcacatcaaggaccaacgc
ccggtcgcaaatctggaaggccccgttggcatcattatggcgccgactcgggagcttgcc
gttcaaattcatcgcgaatgcaaaccatatttgaaggcgcttggtctgcgtggtgtgtgc
gcctacggtggagctcccatcaaggatcagattgcagaattgaagcgaggcgcagaggtc
gtcgtgtgcaccccaggacgcatgatcgatcttctcgctgccaatcagggccgcgtcacg
aatctacgccgcgttacctacgtcgttatggatgaagctgatcgcatgttcgacatgggt
ttcgagcctcagattacacgcatcttgggcaatattcgaccagacaggcagactgtcctc
ttctcggcaacatttccaaagaagatggaatctcttgcacggaagacgctctcgaaacca
gttgagatcgttgtaggaggtcgcagtgtcgtggctcccgaaatcactcaaatcatcgag
gttcgacctgaggatacgaagttccgccgcgttctggagctgctcggcaatctactcgaa
gaagatgaagacgctcgttctctcgtcttcgttgagagacaagaaactgccgaccacatc
ttcaaggaattgggcaagaaggggtaccccagtgtttctgtacacggaggcagggagcag
atcgaccgtgaccaggccatcctcgacttcaaatcgggcgccatacccatcatggtggcc
acgtctgtggcggcgagaggcctcgacgtgaagcagctcaagttggtgatcaactttgat
tcgcccaaccacggagaagattatgtccatcgtgccggccgcactggtcgtgctggcaat
accggtactgctgttacattcgtcactcccgagcaggatcggtatgcgcctttcctcgtc
cgatgcttggaggacagcaagcaagagcctccagatgatctcaaagaactggcagcaaca
cataagaaaaaggtcgaggctggtgaggcatctcgggcaggttcaggctttggtggccat
ggcatcgagcggcttgatgctgctcgtgctgctgaacgtgcacgagagaagagcatgttc
aagactggagacgagccagaggaggagaacgaagaggctaagaaggagaaagacaagaaa
gagagcgaggtggagaagcttgtctcaaaagctgccggcaaggtcaccgatcgtgatgct
caagctgagcagacgggtcaaggtgcgcacttggccaatgctttgaaggtgtcgaagacc
gaaacgcctgcggccaatcctgccaccatcagcgatcctgttgccagagctgcagcggcg
gcggccagtatcaacagtcgtctcggaacaaagggtgcgacgcgtccgggagcaccgatc
gacaatcgtggtccagacgccggagcgttccatgctacgcttgagatcaatgacttcccg
cagaaggccagatgggctgtcacgaacaggacgaatgtggccaagatccttgaagcgacc
gggacttcgatcacttccaagggcatctactacccggccggcaaggaagtcaacgctggc
gacgagccgaagctctacattttggtggagggtgatacagagattgcggtgcagtcggcg
atgcgtgagctttcacgtcacttgaccgaaggcacactgcaggcacaagatgcagagaac
cgttctggaggcggaggccgataccgtgttgtt
DBGET
integrated database retrieval system
