Pseudocercospora fijiensis: MYCFIDRAFT_99560
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Entry
MYCFIDRAFT_99560 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MYCFIDRAFT_99560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_99560
03016 Transfer RNA biogenesis [BR:
pfj03016
]
MYCFIDRAFT_99560
03029 Mitochondrial biogenesis [BR:
pfj03029
]
MYCFIDRAFT_99560
Enzymes [BR:
pfj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
MYCFIDRAFT_99560
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
MYCFIDRAFT_99560
Transfer RNA biogenesis [BR:
pfj03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
MYCFIDRAFT_99560
Mitochondrial biogenesis [BR:
pfj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
MYCFIDRAFT_99560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
19343010
NCBI-ProteinID:
XP_007920983
JGI:
99560
UniProt:
N1Q9M6
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
DSGPKPRCLVTNLQLPNYINHDAPPKKKKPFSIILNQLHSHTLELLVPATCAEVLQQHLS
SAKETGLLHYAKIHLKLLDIISGDFFTEYIQSPGGENTNLSMLSEGRPGIDEVYRFHRGK
LSIEVDKPTFERVGLQGNVIPSRGRKHVEQRYLIEIDLRSPRMVDGKKGFERMKRAFENV
LNETKTWLVVDLENSGALEGGGAMKGFAPLFKQVEATVEKVKEALVPAWPEEVKEEDYVE
AAELLEWIGLAMMGSPRIEKGDDVDPYLCRYQVPTAFGETTTQDLVRLRWRGPIYPAFAQ
RLFLAALK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gactccggccccaagcctcgctgtctagtgaccaacctccaactccccaactacatcaac
cacgacgcccctcccaaaaagaagaaacccttctccatcatcctcaaccaacttcacagc
cacaccctcgaactcctcgtgcccgcgacatgcgccgaagtcctgcaacaacacctctca
tcagccaaagaaacgggacttctccactacgcgaaaatccacctgaaactcctcgacatc
atctccggcgacttcttcacagaatacatccaaagccccggcggggaaaacacaaatctt
tccatgctttccgaagggcgaccggggatcgacgaggtctatagattccaccgagggaaa
ttatccatcgaggtcgacaagccgaccttcgaacgcgtggggctgcaagggaatgtcatt
ccgtcacgggggaggaaacatgttgagcaaagatatcttatcgagatcgatcttcggagt
ccgaggatggtggatgggaagaaagggtttgagaggatgaaacgggcgtttgagaatgtg
ttgaatgagacgaagacgtggttggttgtggatttggagaattcgggggcattggaaggt
ggaggagcgatgaaaggttttgcgcctttgtttaaacaggtggaggctacggttgagaag
gtcaaggaggctttagttcctgcttggccggaagaagtgaaagaggaagattatgtggag
gctgcggaattgttggagtggattggtttggcgatgatggggtcgccgaggattgagaag
ggggatgatgtggatccttatttgtgtcggtatcaggttccgactgctttcggagagacg
acgacacaggatctggttaggctacgatggcgagggcccatttatccggcatttgcgcag
agactatttcttgccgcccttaaa
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