Pseudomonas frederiksbergensis: PFAS1_16295
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Entry
PFAS1_16295 CDS
T04786
Name
(GenBank) helix-turn-helix-type transcriptional regulator
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_16295
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PFAS1_16295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
B12-binding_2
HTH_Tnp_1
HTH_28
HTH_Tnp_ISL3
HTH_17
Gp58
Motif
Other DBs
NCBI-ProteinID:
APV40828
UniProt:
A0A1P8EXA5
LinkDB
All DBs
Position
complement(3515260..3516201)
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AA seq
313 aa
AA seq
DB search
MKSPLDTSASEDLGADFRKALDEGWLPIREVARQTGVNAVTLRAWERRYGLIVPQRTPKG
HRLFSADHVQRILTILTWLNRGVAVSQVKQLLDTPQALTQSVENDWQVLRQTLLQAVTQL
NERTVDDTVNQAMALYPPRTLCAQLLMPLLAELEQRWQGQFGAQMERVFFYSWLRSKFGA
RIYHNNRQLRTAPLLLINHSDLPLEPHLWLTAWLISSADCPVEVFDWPLPAGELALAVDH
LQARGVLLYSSKALNLSQLPKLLNGVSCPKLIAGPTVCIHHTELSARTYKITDLFLAEDP
LAAHQGLIQRGLI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcccactcgacaccagcgccagcgaagacctcggtgccgacttcaggaaagcc
ctcgacgaaggctggctgccgatccgtgaggtcgcgcggcagactggcgtcaacgccgtc
accctgcgggcctgggaacggcgttacggcctgatcgttccgcaacgcacgcccaagggg
catcggctgttttctgccgaccacgttcaacgcatcctgacgatcctcacctggctcaat
cgcggcgtggctgtcagccaggtcaaacaactgctcgacaccccacaggccttaacccaa
tccgtcgaaaacgattggcaagtgctgcgccagacgctgctgcaagcggtcactcaactg
aatgaacgcaccgtcgatgacaccgtcaatcaggccatggcgctgtatccaccacggacc
ttgtgcgcacaactgctgatgcccttgctggctgaactggaacaacgctggcaaggccag
ttcggcgcacagatggaacgagtgtttttttactcctggttacgcagcaaatttggcgca
cgcatctaccataacaaccggcagttacgcaccgcgccactgttgttgatcaatcactcg
gacctgccactggaaccccacctgtggctgaccgcctggctgatcagcagcgccgattgc
ccggtggaagtgttcgactggccacttcctgccggcgaactcgcactggcggtcgatcat
ctgcaagcccgcggcgtactgctgtattccagcaaagccctgaatctttcgcagctgccg
aaacttttgaacggggtcagttgcccaaaattgattgccggaccaacggtatgcatccac
cacaccgagttgtccgcacgaacgtacaagatcactgatttgttcctggctgaagatccg
ctagcagcgcatcagggcctgattcaacgtgggctcatttaa
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