Pseudomonas frederiksbergensis: PFAS1_23020
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Entry
PFAS1_23020 CDS
T04786
Name
(GenBank) RND transporter
KO
K07003
uncharacterized protein
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
PFAS1_23020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMPL
FtsH_ext
Phage_holin_2_1
Motif
Other DBs
NCBI-ProteinID:
APV42057
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Position
4917741..4920257
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AA seq
838 aa
AA seq
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MGNIKQETMPVIRDLRDFDRHSGNLLERLVFNYRPLFMLLMALATVVLGYMAATRLELRP
SFEKMIPQSQPYIQNFLENRQSLRGLGNSVRVVVENTQGDIFDPGYLDVLKQVNDKLFLT
EGVDRAWMKSLWSPAVRWTEVTEEGFQGGPVMPDTYEGKPEQIEQLRQNISRAGIVGSLV
ASDYKSSMLIVPLLDKATASGQRIDYHAFSQMLEEQLRDKIEFAGDSAARKAGEEGKGQY
KVRVIGFAKLMGDLIDGLIQVMMFFGLAVVTSLIIIYAYTRCVRSTLLVVGCSLIAVVWQ
LGIVAWLGYAIDPYSVLVPFLIFAIGVSHAAQKMNGIMQDIARGTHRLIAARYTFRRLFI
AGVTALLADAVGFAVLMLIDIPVIRDLAITASIGVAVLIFTSLLLMPVALSYVGVGAKAA
ERALKIDTRAEGHKGFGKLWDLLDRFTTRKWATGAVLVALLMGIGGFMVSLQLKIGDLES
GAPELRADSRYNRDNAYITSHYALSSDLFAVMIKTAPEGCLNYKTLVLADRLAWELQQYP
GVQATASLVNAVRQITAGTYEGNPKLNSIQRNQDVLNYAAQQASVNSPELFNTDCSLMPV
ITFLKDHKAETLDAVVGIAEKFARENNSEDRQFLLAAGSAGIEAATNIVVREANRTMLLY
VYAAVTLFCLITFRSWRATLVALLPLVLTSILCEALMVAMGIGVKVATLPVIALGVGIGV
DYALYLLSVQLHYQRQGLPLSQAYRNAVSFTGRVVGLVGITLAAGVVCWVWSPIKFQADM
GILLTFMFLWNMLGALVLIPALSYFLLRHPVLQAHVAQATETDTSQRQGMPHALTISE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatatcaaacaagaaaccatgccggtaatccgcgatctgcgggatttcgaccgc
cattccggcaacctgctggagcggttggtgttcaactaccgtccgttgttcatgctgctg
atggcgctggccaccgtggtgttgggctacatggctgcaacgcgcctggagcttcgcccc
agcttcgaaaagatgattccgcagagtcagccgtacatccagaacttcctggaaaaccgc
cagtcgctgcgcggtttgggcaactcggtgcgggtggtggtggagaacacccagggcgat
attttcgaccccggttacctggacgtgctcaagcaggtcaatgacaaattgttcctcacc
gaaggcgtcgaccgcgcctggatgaagtcgttgtggagcccggcggtgcgctggaccgaa
gtcaccgaggaagggttccagggtggcccggtaatgcccgatacctatgagggcaagcct
gagcaaatagaacagctgcgccagaacatttcccgcgccggtatcgtcggcagcctggtg
gccagcgactacaaatcgagcatgttgatcgtgccgctgctggacaaggccacggccagc
ggtcagcgcatcgactaccacgccttttcgcagatgctcgaagagcagttgcgcgacaag
atcgagttcgccggcgacagcgctgcacgcaaggccggggaggagggcaagggccagtac
aaagtccgggtgatcggttttgccaaactgatgggcgacctgatcgacggcctgatccag
gtgatgatgttcttcggcctggccgtggtcacttcgctgatcatcatttatgcctacact
cgatgcgttcgcagcaccttgctggtggtcggctgctcgctgatcgcggtggtctggcaa
ctcggcatcgtcgcctggctcggctatgccatcgacccgtactcggtgctggtgccgttc
ctgatcttcgccatcggtgtgtcccatgcggcgcagaagatgaacgggatcatgcaagac
atcgcccgcggcacccacaggctgatcgccgcacgctacacctttcgccgcctgttcatt
gccggtgtcaccgcgctgctggccgatgccgtcgggttcgcggtgctgatgctgatcgat
attccagtgatccgcgacctggcgatcaccgccagcatcggtgtggcggtgctgatcttc
acctcgctgttgctgatgccggtggcgctgtcttatgtcggcgtcggcgccaaggctgcc
gagcgtgcgctgaaaatcgacacccgcgcagaggggcacaaaggcttcggcaaactgtgg
gacttgctcgaccgtttcaccacgcgcaagtgggccacgggggcggtattggtcgcgctg
ctgatgggtatcggcggcttcatggtcagtttgcagctgaagatcggcgacctggaaagt
ggcgcaccggagttgcgtgccgactcgcgctataaccgtgacaacgcctacatcaccagc
cactacgcgctgtccagcgacctgttcgcggtgatgatcaagactgcgccagaaggctgc
ttgaactacaagacgctggtcctcgccgaccgcctggcctgggagctgcagcagtatccg
ggcgtacaggccacggcatcattggtcaacgcggtgcgccaaatcaccgccggcacctat
gaaggcaaccccaagctcaacagcatccagcgcaatcaggacgtgctgaactacgccgcg
cagcaagcctcggtcaactccccggagttgttcaacaccgattgttcactgatgccggtg
atcaccttcctcaaggaccacaaggccgagaccctggatgccgtggtgggcatcgccgaa
aaattcgctcgcgagaacaacagcgaagatcggcagttcctgctggcggccgggtcggcc
gggattgaggcggcgaccaacatcgtggtgcgcgaggccaatcgcaccatgctgctttac
gtctatgcggcggtcacgctgttctgcctgattaccttccgcagttggcgcgccacgttg
gttgcgttgttgccgctggtgctgacctcgatcctctgcgaagcgttgatggtcgccatg
ggcattggcgtgaaagtcgccaccctgccggtgatcgcattgggcgtcggcatcggcgtg
gattacgcgttgtacctgctcagcgtgcagttgcattaccagcgtcagggcctgccgctg
agtcaggcgtaccgcaacgccgtgtcgtttaccggccgggtcgtgggcctggtgggcatc
accctggcggccggcgtggtgtgttgggtctggtcgccgatcaagttccaggccgacatg
ggcatcctgctgaccttcatgttcctgtggaacatgctcggcgcgctggtgctgatccct
gccctgtcgtacttcctgctgcgtcaccccgttttgcaagctcacgtggcgcaagccact
gaaactgacacctctcaacgccagggtatgccgcatgccctgaccatttccgagtaa
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