Pseudomonas frederiksbergensis: PFAS1_25710
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Entry
PFAS1_25710 CDS
T04786
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00500
Starch and sucrose metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PFAS1_25710
Enzymes [BR:
pfk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PFAS1_25710
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
GHL5
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
APV42540
UniProt:
A0A1P8F252
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Position
complement(5479619..5481778)
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AA seq
719 aa
AA seq
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MTSPKKAAPEPQVEASRIREGLPFPLGATWDGLGVNFALFSANATKVELCIFDDAGEVEL
ERIELPEYTDEIYHGYLPDAHPGMIYGYRVYGPYDPANGHRFNPNKLLIDPYAKQLVGQL
KWSEALFGYTIGHPDADLSFDERDSAPFVPKCKVIDPAHTWGRDHRVSVPWDKTIIYETH
VRGISMRHPSVPENLRGTFAGLMVDDVLEHIRKLGVSTVELLPIHAFVNDQHLLHKGMTN
YWGYNSIAFFAPDPRYLASGKIDEFKEMVAHLHEANLEVILDVVYNHTAEGNEQGPTLSM
RGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMHVDGFRFDL
ATILGRYHDGFDERHSFLVACRQDPVLRQVKMIAEAWDCGPGGYQVGNFPPGWVEWNDKF
RDTVRAFWKGDDGQLADFANRMTASGEMFNQRGRRPYASVNFVTAHDGFTLNDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPTDDPEINELRQRQMRNFFATLLLSQGTPMLVAGD
EFARTQEGNNNAYCQDSEIGWVNWDLSEDGKALLKFVKRLIKLRLAYPILRRGRFLVGNY
NEDIGVKDVTWLAPDGSEMSVEQWEEAHGRCLGMLMDGRAQETGIRRKGADATLLLVVNA
HHDIVNFLLPEVPDGAFWTCMIDTNQPSIRGQERFEFGHEYSVTGRSLLLFELQREEEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtccgaagaaagccgcgccagaacctcaagtcgaggcctcgcgaatccgtgaa
ggcttgcccttcccgctgggcgcgacctgggatggcctgggggttaacttcgccttgttt
tccgccaatgccaccaaggtcgagctgtgcatcttcgatgatgccggcgaggttgaactg
gaacgcatcgaactgccggaatacaccgacgagatctatcacggctacctgcccgacgcg
catccggggatgatctacggctaccgtgtctatggcccgtacgacccggcgaacggtcat
cgcttcaaccccaacaaactgctgatcgacccctacgccaaacaattggtcggccagttg
aaatggtccgaggctctgttcggctacaccatcggccaccccgacgccgacctcagtttc
gatgagcgcgacagcgccccgttcgtgcccaagtgcaaggtgatcgacccggctcacacc
tggggccgcgaccatcgggtcagcgtgccgtgggacaagaccatcatttatgaaactcac
gtgcgcggcatcagcatgcgtcacccttccgtccccgagaacctgcgtggcaccttcgcc
ggattgatggtcgatgacgtgctggaacacatccgcaagctcggcgtgtcgactgttgaa
ttgctgccgattcacgccttcgtcaacgaccagcatctgttgcacaaaggcatgaccaat
tactggggctacaacagcatcgcgttctttgcccccgacccgcgctacctggccagcggg
aagatcgacgagttcaaggagatggtcgcgcacctgcacgaggccaatctcgaagtgatc
ctcgacgtggtctacaaccacaccgccgagggcaatgagcaaggcccgaccctgtccatg
cgtggcatcgacaacgcctcttactaccgcttgatgcccgacgacaagcgcttctacatc
aacgattccggtaccggcaacaccctggacctgagtcacccgtgcgtgctgcaaatggtc
accgactccctgcgctactgggcctcggaaatgcacgtcgacggtttccgcttcgacctg
gcgaccattctcgggcgctaccacgatggcttcgacgaacgtcacagcttccttgtggcc
tgccgtcaggacccggtgctgcgtcaggtgaagatgattgcagaagcctgggattgcggc
cccggcggctatcaggtcggtaactttccaccgggctgggtcgagtggaatgacaaattc
cgcgacaccgtgcgtgcgttctggaaaggcgacgacggccaactggcagacttcgccaat
cgcatgaccgcttccggcgagatgttcaatcagcgtggccggcggccgtacgcctcggtg
aatttcgtcaccgcccacgacggtttcaccttgaacgacctggtgtcgtacaacgacaaa
cacaacgaagccaacgacgagaacaatcaggacggcagcaacaacaacctgtcctggaac
cacggcgtcgaaggtccgaccgacgatcccgaaatcaatgagctgcgtcagcgccagatg
cgcaatttctttgccacgctgctgctgtcccaaggcacaccgatgctggtggccggcgac
gaattcgcccgcacccaggaaggcaacaacaacgcctattgccaggacagcgagatcggt
tgggtcaactgggacctgagcgaagacggcaaggccctgctcaagtttgtcaaacggctg
atcaagttgcgcctggcttatccgatcctgcgtcgcggtcggttcctggtgggcaattac
aacgaggacatcggcgtcaaggacgtcacctggctcgccccggatggcagcgaaatgtct
gtcgaacaatgggaggaagcccatggccgctgcctcggcatgctaatggatggccgcgcc
caggagaccggtatccgccgcaaaggcgccgacgccaccttgctgttggtggtcaacgcg
catcacgacatcgtcaatttcctgcttccggaagtgcccgacggcgctttctggacctgc
atgatcgacaccaaccaaccgtcgatcagggggcaggaacgcttcgagttcgggcacgaa
tattcagtcactggccgttcgctgctgctgttcgaattgcagcgtgaggaagaagagtga
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