Pseudomonas protegens Pf-5: PFL_1602
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Entry
PFL_1602 CDS
T00249
Symbol
rluB
Name
(GenBank) pseudouridine synthase B, ribosomal large subunit
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfl03009
]
PFL_1602 (rluB)
Enzymes [BR:
pfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PFL_1602 (rluB)
Ribosome biogenesis [BR:
pfl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PFL_1602 (rluB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AAY90899
UniProt:
Q4KGA5
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Position
1797130..1798320
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AA seq
396 aa
AA seq
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MSDTDQNDQEIRPAGEKLQKVLARIGVGSRRDVESWISQGRIKVNGKEATLGLRVDLHDA
ISIDGKVIKREEAAESVRRVIMYNKPDGEICTRDDPEGRPTVFDKLPRPREGRWINIGRL
DINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKF
TDIQQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGR
WREMSQYEVDVLSAEVGLTPVAMPQLNAKSKDKLERMQRKSSRPVGKSERVRTLRPANGS
AATPRVSREPQIEGERPGRKPAARPDGERGSRAPRPATGRGTPVADRPADTKRPAKPASK
SKRPSLVLDKDAPSGKRRGAPAGSGQRPGFGRRKPE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgatcagaacgaccaggaaatccgtccagccggcgaaaaactgcagaaa
gtcctcgcccgcatcggcgtcggctcgcgccgcgatgtcgagtcctggatcagccagggc
cggatcaaggtcaacggcaaagaggccaccctgggcctgcgcgtcgacctgcatgacgcc
atttccatcgatggcaaggtgatcaagcgcgaagaggccgccgaatcggtgcgccgcgtg
atcatgtacaacaagcccgacggcgagatctgcacccgcgacgacccggaaggccgcccg
accgtgttcgacaagctgccgcgtccgcgcgaaggccgctggatcaacattggccgcctg
gacatcaacaccaccggtcttttgatgttcaccaccgacggtgagctggccaaccgcctg
atgcacccttcctacgagatggaccgtgagtacgcggtgcgtgtgcgtggcgaggtcgac
gacgagatgatcgagcgcctcaaggccggcgtcatgctcgaagacggcccggccaagttc
actgacattcagcaggcgcccggtggcgaaggtttcaaccactggtaccactgcgtggtg
atggaaggtcgcaaccgtgaagtgcgccgcttgtgggaatcccagggcctggtggtcagc
cgcctgaagcgcgtgcgcttcggtccggtgttcctgaactccgacctgcccatgggccgc
tggcgcgaaatgagccagtacgaagtcgatgtgctcagcgccgaagtcggcttgacgccg
gtggccatgccgcagctcaatgccaagtccaaggacaagctggagcgcatgcagcgcaaa
tcctcgcgtccggtgggcaagagcgagcgcgtgcgcaccctgcgtccggccaatggcagc
gcggccaccccgcgtgtttcccgcgagccgcagatcgaaggcgagcgtcctggccgcaag
ccggctgcccgtccggatggcgagcgtggctcccgtgctccgcgtccggctactggccgc
ggcactccggtggccgaccgcccggcggacaccaagcgtccggccaagccggcgtccaag
tccaagcgcccaagcctggtgctggacaaggacgcaccttccggcaagcgccgtggcgcc
ccggccggttccggccagcgtcccggttttggtcgccgcaagccggagtga
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