Pseudomonas protegens Pf-5: PFL_3520
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Entry
PFL_3520 CDS
T00249
Name
(GenBank) IPT/TIG domain/outer membrane autotransporter barrel domain protein
Organism
pfl
Pseudomonas protegens Pf-5
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
TIG
SprB
TIG_SUH
Motif
Other DBs
NCBI-ProteinID:
AAY92787
UniProt:
Q4KAW0
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Position
4054136..4058311
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AA seq
1391 aa
AA seq
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MKTSRSCFHAWLARPLAFLFLLLNLALAAQAQAAAPVITSPVSGTTLPSVAVGQSMSIPI
LSVGGATPLDQWFQCDIDDPGYDGITPCLPPGLILDSSPHSSATTLHGTPTTAGNYTFSI
SLNDGVGQAGVATYNLVVTSSAVPTLTSVSPNSGSIAGATAVTLTGSNFTGATSVSFGGT
AAPSYTVNNATTITATTPAHAAGAVNVTIITPGGSATLTNGYTYAVPAPTVGPVSATVAA
NSSANSITLSLSGGAATSVAVASAASHGTATASGTSISYTPTAGFSGTDSFTYTATNASG
TSSPATVTITVTPPTLAITPTTLPNGTQSTAYSQSLSTSAGTAPYSYAITAGSLPAGMSL
NTSTGTLSGTPTAGGAFNLTITATDAYSATGSRAYTLLINGLPPVANALSTTVAANSSAN
TIPLNITGGAATSVAVASAPSHGSATASGTSISYTPAAGFSGADSFTYTATNASGTSSPA
TVSITVGAPSITLSPGSLSNGTAGTPYSATLNATGGAVPYSYSITSGSLPTGLSLNTGTG
AISGIPSAAGTSNLTITATDTNGATGSQAYSITINIQAPVASAGSATVAANSSANPIPLS
LSGGAATSVAVASAASHGTATASGTSISYTPTAGFSGADSFTYTATNASGTSSPATVSIT
VSAPSITLSPGSLSNGTAGTPYSATLSATGGTVPYSYSITSGSLPTGLSLNTGTGAISGI
PSAAGTFNLTITATDTNGATGSQAYSITINIQAPVASAVSATVAANSSANPIPLSLSGGA
ATSVAVASAASHGTATASGTSISYTPAAGFSGADSFTYTATNASGTSSPATVTITVSAPS
LVLTPASLGAGTAGSPYSATLSATGGTVPYSYSITSGSLPTGLNLNTASGLISGTPITSG
SSNLVITATDANGATGSQAYSITIAAVAITVPASSQILAAGQSATVDLTQGATGGPFTHA
TLGTVTPASAGRAMMMGPFSMRFVPSAAFAGTAVVSFSLHNLSGSSASSTMSFIIQTRAD
PTRDAEVIGLLNAQTRAAERFASTQMDNFNQRMEQLHQMRCDRNSFNASLRKDGSNVPLG
EVAKVIKEQLGDSAHQTEQEKREAAAAAQDNCKQDDLAFWSDGFVNTGSTHARGAQGNSF
TTLGLSAGVDYRLSPTLIAGVGIGYGNDRSEIGSNKTRSDADAIGIATYLSLNLAPQVFV
DGLLGYNRISFDSRRYITGSNDDYARGSRDADQLFASLTASYEYRQGPLSLTPYSRLNAS
VTRLDAFSEKGGGIYGLSYDEQNQQNFTSYLGLRTGYDLMTRVGVVTPKVGLAWGHNFSS
SSDYKMRYTDQGDEGLLYRLKPDALDRDFASLDMGVDFNLGRAWQMGFSYKTALGSDERN
DSLRIGLNGKF
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcacgcagttgtttccacgcttggctggcacgtccgctggcctttctcttc
ctgctgttgaacctggccctggctgcccaggcccaggccgcagcgccagtgatcaccagc
ccggtatcgggcactaccctgccgtcagttgcggtgggccagtcgatgagcatcccgatc
ctttccgtgggcggcgcaacacccctggatcaatggttccagtgcgacatcgacgatccg
ggctacgatggcattaccccctgcctgccgccggggttgatcctcgactcctcgccccac
agttcagccaccaccctgcacggcacaccgaccaccgccggcaactataccttcagcatt
tccctgaatgacggcgttggccaggctggagtcgccacctacaacctggtggtcaccagt
tctgcggtcccaaccctgacgtcggtcagcccaaacagcggcagcatcgcaggcgccacc
gccgtcaccctcaccggcagcaattttaccggcgccacctcggtcagcttcggcggcacg
gcggcccccagttataccgtcaacaacgccacgaccatcacggccaccacaccggctcat
gccgcgggcgcagtgaacgtaacgatcatcacccctggcggcagcgcgaccctgaccaat
ggctatacctacgccgtgcccgcccccacagtcggcccggtcagcgccacggtggccgcc
aacagcagcgccaactcgatcactctgagcctcagtggcggcgccgccaccagcgtcgcc
gtggccagcgccgccagccatgggactgccaccgccagcggcaccagcatcagctacacc
cccaccgccggtttctccggcaccgacagcttcacctataccgccaccaacgccagcggc
acttccagcccggctacggtgaccatcaccgtcaccccgcccaccctggcgataacaccg
acgactctgcccaacggcactcaaagcacggcctacagccagtccctgagcacctccgcg
ggcaccgccccctacagctacgcgatcactgccggcagcctgccggccggcatgagcctg
aacaccagcaccggtacactcagcggcacccccactgccggtggtgccttcaacctgacc
atcaccgccaccgacgcctacagcgccaccggctctcgcgcctacaccttgttgatcaac
ggcctgccaccagttgccaacgcactgagcaccacggtcgcggccaacagcagcgccaac
acgattcccttgaacatcaccggtggtgccgccaccagcgtcgccgtggccagcgccccc
agccatggcagcgccacggccagcggcaccagcatcagctacacgcctgccgccggtttc
tccggtgccgacagtttcacctacaccgccaccaacgccagcggcacttccagcccggcc
acggtgagcatcaccgtcggtgccccgagcatcaccctgagccccggctccctgagcaac
ggcaccgccggcacgccctatagcgcaaccctcaacgccaccggcggcgctgtgccctac
agctacagcatcacatccggcagcctgccgaccggcctcagcctgaacaccggcaccggt
gcgatcagcggcataccgagcgccgctggcacctccaacctgaccatcaccgccaccgat
accaacggcgccaccgggtcccaggcctactcgatcaccatcaatattcaggcaccggtt
gccagcgccggcagcgccacggtcgcggccaacagcagcgccaacccgatccctctgagc
ctcagtggcggcgccgccaccagcgtcgccgtggccagcgccgccagccacgggactgcc
acggccagcggcaccagcatcagctacacccccaccgccggtttctccggcgccgacagt
ttcacctacaccgccaccaacgccagcggcacttccagcccggccacggtgagcattacc
gtcagtgccccgagcatcaccctgagccccggctccctgagcaacggcactgccggcacg
ccctatagcgctaccctcagcgccaccggcggcactgtgccctacagctacagcatcaca
tccggcagcctgccgaccggcctcagcctgaacaccggcaccggtgcgatcagcggcata
ccaagcgccgctggcaccttcaacctgaccatcaccgccaccgataccaacggcgccacc
gggtcccaggcctactcgatcaccatcaatattcaggcaccggttgccagcgccgtcagc
gccacggtcgcggccaacagcagcgccaacccgatccctctgagcctcagtggcggcgcc
gccaccagcgtcgccgtggccagcgccgccagccacgggactgccacggccagcggcacc
agcatcagctacacgcctgccgcaggcttctccggcgccgacagtttcacctacaccgcc
accaacgccagcggcacttccagcccggccacggtgaccatcaccgtcagcgcgcccagc
ctggtactgaccccggcttccctgggggccggcacggcaggcagcccctacagcgcaact
ctcagcgctaccggtggcaccgttccctacagctacagcatcaccagcggtagcctgccg
acgggcctgaacctgaacactgccagcggtctgatcagcggtacgccgattaccagcggc
agcagcaacctggtcatcaccgccaccgatgccaacggtgccacgggctcacaggcctat
tcgatcaccatcgctgccgtggcgatcaccgtgcccgcctccagccagatcctcgcagcg
ggccagtcggccaccgtcgacctgacccagggcgccaccggcggcccgttcacccacgcc
accctgggcacggtgaccccggcctcggccggccgggcgatgatgatgggccccttctcg
atgcgcttcgtgccatcggcggccttcgccggtacggcggtcgtcagcttcagcctgcac
aacctcagcggttccagcgcctccagcaccatgagcttcatcatccagacccgtgcggac
ccgaccagggacgccgaggtcatcggcctgctcaacgcccagacccgcgccgcggaacgc
tttgccagtacccagatggacaacttcaaccagcgtatggagcagctgcaccagatgcgc
tgcgaccgcaattcgttcaacgccagcttgcgcaaggacggcagcaacgtaccgctgggc
gaggtcgccaaggtgatcaaggaacaactgggagattcggcccaccagaccgagcaggaa
aaacgcgaggccgccgctgccgcgcaggacaactgcaagcaggatgacctggcgttctgg
agcgacggtttcgtcaacaccggctcgacccacgcccgtggcgcccagggcaacagtttc
accaccctgggcctgagcgccggcgtcgactatcggctgtcgcccacgctgatcgccggg
gtcgggatcggctacggcaacgaccgcagcgagatcggcagcaacaagacccgcagcgat
gcggacgccatcggcatcgccacctacctgagcctgaacctggcgccccaggtgtttgtc
gacggcctgctgggctacaaccgcatcagcttcgactcgcgtcgctacatcacgggcagt
aacgacgactatgcccgtggctcgcgcgatgccgaccagttgttcgcctcgctgaccgcc
agctacgagtaccgccagggaccactgtcgctgaccccctacagccgcttgaacgccagc
gtcacacgcctggacgccttcagtgaaaaaggcggaggcatctacgggctttcctatgac
gagcaaaaccagcagaacttcacttcctacctgggcctgcgcaccggttacgacctgatg
acccgggtcggcgtggtcacccccaaggtcggcctggcctggggtcacaacttcagtagc
agcagcgactacaagatgcgctataccgaccagggcgatgaaggccttctctaccggctc
aagcccgatgccctggaccgcgacttcgccagcctggacatgggtgttgacttcaacctc
gggcgtgcctggcaaatgggcttctcctataagaccgcgctgggttcggatgaacgcaac
gacagcctgcgcatcggtttgaacgggaagttctag
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