Pseudomonas protegens Pf-5: PFL_4613
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Entry
PFL_4613 CDS
T00249
Symbol
oprB
Name
(GenBank) carbohydrate-selective porin OprB
KO
K07267
porin
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_4613 (oprB)
Transporters [BR:
pfl02000
]
Other transporters
Pores ion channels [TC:
1
]
PFL_4613 (oprB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AAY93860
UniProt:
Q4K7T6
LinkDB
All DBs
Position
complement(5321702..5323051)
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AA seq
449 aa
AA seq
DB search
MKKQHSNTRLLCQLSAVAALVLSGNAMADEAFSADSKWMTGDWGGERTKLIEQGIDIKAD
YVGEMGANLHGGYNDDKTGRYSDQFGLGVAFDLQKLLGWDNTQAKIQLTNRNGQNISNDR
IGDPRAGTLSSSQEVYGRGHMVRLTQLWVQHQFLDGKLDVKAGYFGEGEDFNTFPCDFQN
LAFCGSQVGNWATGIWYNWPVSQAALRIKYNITPELYAQIGAYNQNPSQLEHGNGFKLSG
SGTKGTVLPVELVWSPKLNSLPGEYRVGYYKSTADANDVRKDVNGQDAANTGDAYRVHNS
KHGYWFVGQQQLTTHNGDASRGLNIAANATFHDKDTNVVDNYQSLMFVYKGPFDARPKDD
VGIGFARIHVNDDVRKNAQLINEDNGISNYDNPLYMPLRDTEYNYEINYGFHVTNWLTVR
PNLQYITHPGGVDEVDNALVAGLKIQSVF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaacacagcaacacccgattgctctgccagttgtcggcggtggcggccctg
gtcctgtccggcaatgccatggccgatgaggcgttcagcgccgattcgaaatggatgacc
ggcgactggggcggcgagcgcaccaagctgatcgagcaggggatcgacatcaaggccgac
tacgtcggtgaaatgggcgccaacctgcatggtggttacaacgacgacaagaccgggcgc
tacagcgaccagttcggcctgggcgtggcgttcgacctgcagaagcttttgggctgggac
aacacccaggccaagatccagctgaccaaccgtaacggccagaacatctccaacgaccgc
atcggcgacccgcgtgccggcaccttgagctcctcccaggaggtctatggccgggggcac
atggtccgcctgacccagttgtgggttcagcaccagttcctcgacggcaagctggacgtc
aaggccggctacttcggcgaaggcgaagacttcaacaccttcccctgcgacttccagaac
ctggcgttctgcggctcccaggtgggtaactgggccaccggcatctggtacaactggccg
gtcagccaggcggcgctgcgcatcaagtacaacatcacccccgagctgtatgcgcaaatc
ggcgcctacaaccagaacccgtcgcaactggagcacggcaacggcttcaagctcagcggc
agcggcaccaagggcaccgtattgcccgtggaactggtctggtcgcccaagctcaacagc
ctgccgggcgagtaccgcgtcggttactacaagagcacggccgatgccaatgatgtgcgc
aaggacgtcaatggtcaggatgccgcgaacaccggcgatgcctatcgcgtgcacaacagc
aagcacggctactggttcgtcgggcagcagcaactcaccacccacaacggtgatgcttcc
cgtggtctgaacatcgccgccaacgccaccttccacgacaaggacaccaacgtcgtcgac
aactaccagtcgctgatgttcgtgtacaaggggccgttcgatgcgcgtcccaaagatgac
gtcggcatcggttttgctcggatccacgtcaacgacgatgtgcgcaagaacgcccagctg
atcaacgaggacaacggcatcagcaactacgacaacccgctgtacatgccgctgcgcgac
accgaatacaactacgagatcaactacggcttccatgtcaccaactggctgaccgtgcgc
cccaacctgcaatacatcacccacccgggtggtgtggatgaagtcgacaacgcgctggtg
gccggcctgaaaattcagtcggtgttctaa
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