Pseudomonas protegens Pf-5: PFL_5122
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Entry
PFL_5122 CDS
T00249
Symbol
rsmC
Name
(GenBank) ribosomal RNA small subunit methyltransferase C
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfl03009
]
PFL_5122 (rsmC)
Enzymes [BR:
pfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
PFL_5122 (rsmC)
Ribosome biogenesis [BR:
pfl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PFL_5122 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
MTS_N
Methyltransf_25
Methyltransf_12
Methyltransf_2
PrmA
Methyltransf_31
Methyltransf_11
Gp44_lid
Methyltransf_23
Methyltransf_16
Motif
Other DBs
NCBI-ProteinID:
AAY94344
UniProt:
Q4K6D2
LinkDB
All DBs
Position
5887211..5888209
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AA seq
332 aa
AA seq
DB search
MDTRSEVLLRQAELFQGSLLLAGLAADDLLGRLPNARGWSWHAGDQAALEARFPGRSHFG
VDAPAQSFDSAVLFLPKSKDLTDYLLNALASRLAGRELYLVGEKRSGVESAAKQLNPFGK
PRKLDSARHCQLWQVTVANAPEPLTLQSLAQEYELPLAEGPLKVISLPGVFSHGRLDRGT
ALLLEHLDHLPAGHLLDFGCGAGVLGATVKRRYPDSRVTLLDVDAFAAASSRLTLAANGL
EAEVLTGDGIDAAPMGLNGILTNPPFHTGVHTDYQATENLLRKAAKHLQKGGELRVVANS
FLRYQPLIEEHLGPCAIKAEGQGFRIYRAKRG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggacacacgcagtgaagtactgttgcgtcaggctgaattgtttcaaggctcactgctg
ctggccggcctggccgccgacgatctgctgggccgcctgcccaatgcccggggctggagc
tggcacgccggcgaccaggcagccctggaggcgcgctttcccggccgcagtcactttggc
gtagacgcaccggcccaatccttcgacagcgccgtgctgttcctgcccaaatccaaggac
ctcaccgactacctgctcaacgccctggcctcgcgcctggccgggcgcgaactgtacctg
gtgggcgagaagcgcagcggcgtggagagtgcggccaagcaactcaaccccttcggcaaa
ccgcgcaagctcgatagcgcccggcactgccagctgtggcaggtcacggtggccaatgct
cccgaaccgctcaccctgcagagcctggcccaggagtacgaactgccgctggccgaaggc
ccgctgaaagtcatcagcctgccgggggtgttcagccatggccggctggatcgcggcacc
gcgctgctgctggagcacctggaccacctgcccgccggccacctgctggacttcggctgc
ggtgccggagtgctcggggccaccgtgaaacgccgctacccggacagccgcgtgaccctg
ctggatgtggacgccttcgccgccgccagcagccgcctgaccctggcggccaacggcctg
gaagccgaggtgctgaccggtgacggaatcgacgccgcgcccatggggctgaacggcatc
ctgaccaatccgcccttccacaccggggtccataccgactaccaggcaacggaaaacctg
ctgcgaaaagcagccaaacatctgcaaaaaggtggagaactgcgagtagttgccaacagc
ttcctgcgctaccagccgctgatcgaagagcacctggggccctgtgcgatcaaggccgaa
ggccagggctttcgcatttatcgggccaagcgcggctga
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integrated database retrieval system
