Perca flavescens (yellow perch): 114547941
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Entry
114547941 CDS
T07494
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv02010
ABC transporters
pflv04145
Phagosome
pflv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114547941
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114547941
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114547941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pflv02000
]
114547941
Enzymes [BR:
pflv01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
114547941
Transporters [BR:
pflv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
114547941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_30
AAA_21
SMC_N
AAA_16
Zeta_toxin
NTPase_1
AAA_15
AAA_29
RsgA_GTPase
AAA_5
DUF6659
AAA_23
Motif
Other DBs
NCBI-GeneID:
114547941
NCBI-ProteinID:
XP_028423290
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All DBs
Position
21:5561343..5572926
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AA seq
710 aa
AA seq
DB search
MNQVSACGLFLILLDAVLCLALWAGLVLLKCSSCGGLAGVWAFAAAKWVILHVFTSVLTD
GKPQAVLRRFVALLCLLSPVFESGRIFMAPPSEAYTGPSPNLSMLLLGLMSSSLACVVWE
KGLCGDSTKKKDNTKQEAWPLLVRMLKYFKPDTLYLIAAFGFLILGVICDTYIPLYQGYV
IDMLRGELLQTSFCYAVGQLALVSLGSALFSSFRGGLFMYTLTRLNKRLKHLLFHTLLQQ
EVHFFEENKPGRLSSRLHSDVDRMGRTVAMNANVLVRSTVKTCLMLRVMLGLSWELTVLT
CIEMPLLAILQNKYSTLSKELKDQMQDCHAQNKDLATQTLSGIHTVRSFKGEKDELRRFK
ESLDRMCAVQRRSSIYSAVFCLIRRLVTVGIKILMLVQARGLISSGHLSIGSLVSFLLYQ
KPMSNNLKELMYCCGDTMSTVGVISKVFSYLDRTPKCKMAGELAPEKLEGRIVFQNVTFT
YPSSSEEKPALKSVSIELRPGQMTALVGPSGSGKTSCVSLLKRLYEPQGGQILLDGEPLH
HYEPKYLHQKMALVSQNPVLFSGSLKYNIAYGLKDCPIEKVKEAAKKANADNFISKLEKE
YDTDIGECGGKLSDGQRQCIAVVRALVREPQVIILDEATSKLDVEVHHAVLQEVLARGRT
VLVVTHQLKTAEKADHIVFMEKGAVVEEGTHQELMAKRGSYHRLKEELFS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagtgtcagcatgtggattattccttattctgttagacgctgtgctttgtttg
gcactgtgggccggactggtgctgctgaagtgctccagttgtggtggactggcaggtgtg
tgggcctttgcggcagcaaagtgggtcattctccatgttttcacatctgtactgacggat
gggaagccccaggctgtgctccgcaggtttgtggcactcctctgccttctctctcctgtg
tttgaaagcggacggatctttatggcgcctccctcagaggcgtacacaggaccatctcct
aacctcagcatgctgctcctgggcctcatgtcctcgtcgctggcctgtgtggtttgggaa
aagggcctctgtggtgattcaacgaagaaaaaggacaacactaaacaggaagcctggccg
ctgcttgtgaggatgctgaaatacttcaaaccagacaccctttaccttattgcagctttc
ggtttcctcatcttaggtgtcatctgtgatacatacatcccattgtatcaggggtacgtc
attgatatgctcagaggtgaactacttcaaaccagcttctgttatgccgttggacagctg
gcacttgtctctcttggaagcgctctgttctccagctttagaggaggcctatttatgtac
accctgaccagactgaacaagagactgaaacatctgctgtttcacaccctcctgcagcag
gaagtgcacttctttgaggagaacaaacctggacgtctttcctcccgcctgcactcggat
gtggacaggatgggccgtacagttgcaatgaacgccaacgtgctcgtccgcagcacagtc
aaaacctgcctcatgctcagagtgatgctaggcctgtcctgggagctcactgtgctcacc
tgcatagagatgccactcttggccatcctgcagaacaaatacagcaccttgtccaaggag
ctgaaagatcagatgcaggactgccacgctcagaacaaagacctggccacccagacctta
agcgggattcacacggtccgaagctttaagggagagaaagatgaactaagaaggtttaag
gagtctctggaccgcatgtgcgctgtgcagagacgttcaagtatctacagcgcagtcttc
tgcttaatacgcaggctggtgactgtggggataaagatactgatgctggtccaggcccgc
gggctcatctcgtcgggtcacctcagcatcggtagtctcgtctccttcttattgtaccag
aagcccatgtcaaacaatttaaaggagcttatgtactgctgcggagatacgatgtccaca
gtcggagtcatctccaaagtgttcagttatcttgacagaacaccaaagtgtaagatggcg
ggagagttagctcctgagaagctggagggaagaattgttttccaaaatgtcaccttcacg
tacccctcctcttctgaagagaaaccagctctgaagtcggtttctatagaacttcggcca
ggacagatgaccgccctggtgggtccctccggcagtgggaagacttcctgcgtcagcctc
ctgaagaggctgtatgaacctcaggggggacagatcctgctggacggagaaccgctgcac
cattacgaacccaaataccttcatcaaaagatggccctggtatcccagaatcccgtgctg
ttttctggttcactgaaatacaacattgcgtacggcctgaaggactgccccattgagaag
gtgaaggaagctgcaaagaaggccaacgcagacaacttcatctctaaactggagaaggaa
tatgacacagatataggtgaatgtggtggcaaactttcagacggacagaggcagtgcatc
gctgttgtcagagctctggttcgagagccgcaggtcatcatactggatgaggctaccagc
aaactggatgttgaagtgcaccacgctgtgctgcaggaggttctggctcgtgggcggacc
gtcctggtggtgactcatcagctgaagactgcggagaaggcggatcacatcgtcttcatg
gagaagggagcagtcgtggaggaggggacgcaccaagaactcatggccaagagaggaagc
taccatcgtctgaaagaggaactgttctcttaa
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