Perca flavescens (yellow perch): 114548017
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Entry
114548017 CDS
T07494
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114548017
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114548017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
BshC
Motif
Other DBs
NCBI-GeneID:
114548017
NCBI-ProteinID:
XP_028423452
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All DBs
Position
21:4534319..4547185
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AA seq
657 aa
AA seq
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MANTAAEEAAPISKQQQQQQLCVVCSGVLSGDMPAACSHSVCGPCLGDKHKGCPECLQSP
EKDKSEPADCPKQNGTEAKGPGTESKEEQDAIKATEEIKIQEDLKGSEDPEKPEEGKQAG
ELLTEPVTNGAKEEVKEEGAKEEPLGPDDVVCDSCIESPRRALKSCLTCLVSYCEAHLRP
HLEKPKFQNHRLVEPLRDIERRTCESHKWPLELFCCADAVCVCQDCVTEEHKGHNTVPVV
EARSRIERELKEKQTEMGKTLTAAENAINKLQLNTVNIEQSGKEVRAVMESQFEELQAVM
ERAKREVTEILEGEEKQALKQAEGIRVHLEQRCTELKKTQAQMEKLSKNKNDVDFLQEYS
EWKKEATDISLPGVYIGLMDRLNSFSRVIVDSTRELCAMLVSLYVEKVKETCKNDKTGIK
TTVREIAAAKQNMSIPDPVTHADFLKYAAQVSFDADTAHKFLRLTEDNRKVTNTTPWQHP
YPDLPERFENWRQVLATESFYLGRHYFEADISGEGTHIGLTYKSIDRKGNESNCCITGNN
FSWCLQWNGRTFSAWHSDVEIPLSVEIPLSVEKFIRVGVYLDYRKGLLSFYGVDDTMTPI
HQYKAEFLEPLYPAFWLSKKENLVALVAPGEPLQVKSPSPSTPPENRATVSNTAAQQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacacggccgcggaagaagcagctcccatctccaaacagcagcagcagcagcag
ctgtgtgttgtctgctcaggtgttttaagcggagacatgccggcagcctgtagccactct
gtctgtggcccctgcctcggggacaaacataaaggatgtcccgagtgtctgcagagcccc
gagaaggacaagagtgaacctgcggactgtcccaaacagaatgggacagaggctaaaggc
cctgggaccgagagcaaagaggagcaggatgctataaaagcgacagaggagatcaaaatc
caagaagacctgaaggggtctgaggaccccgaaaagcccgaggaggggaagcaagcaggg
gagctgctgaccgaacctgtgacaaatggagcaaaagaggaggtgaaagaagagggggcg
aaggaggaacctttgggccccgacgatgtggtgtgcgactcgtgcatcgagagcccccgc
agggccctcaagtcctgcctcacctgcctggtgtcgtactgcgaggcccacctgcggcct
cacctggagaagcccaagtttcagaaccaccggctggtggagccgctcagggacatcgag
aggcggacctgcgagagccacaagtggcccctggagcttttctgctgcgccgacgccgtc
tgcgtgtgccaggactgcgtgacggaggagcacaagggccacaacaccgtccccgtggtg
gaggctcgcagtcggatagagagggaactgaaggagaagcagacggagatggggaagacg
ttgacggcagcagagaacgccatcaacaagcttcaactcaacacagtcaacattgagcaa
tcggggaaggaggtgcgcgcggtgatggagagccagttcgaggagctgcaggcggtgatg
gagagggccaagcgggaggtgacggagatcctggagggcgaggagaagcaggcgctgaag
caggccgagggcatccgggttcacctggagcagaggtgcaccgagctgaagaagactcag
gcgcagatggagaagctctccaagaacaaaaatgatgtggatttcttacaggagtactca
gagtggaagaaagaagccactgatatctctctgcctggggtctacatcggcctgatggac
cgcctgaattccttcagccgcgtgatcgtcgactccacgcgggagttgtgtgccatgctc
gtgtctttatacgtagagaaagttaaagagacgtgcaagaacgacaaaacggggataaag
acaacagttcgtgaaattgctgcagccaaacagaacatgtctataccggatccagtgact
catgccgacttcctcaagtatgccgcccaagtgagtttcgacgctgacaccgctcacaag
ttcctgcggctgacagaagataacaggaaggtgactaacaccacgccctggcagcatcct
tatcccgatctacccgagaggttcgagaactggcgccaggtcctggcgacggagagcttc
tacctggggcgccactactttgaggcggacatcagcggcgagggcacacacatcggtctc
acctacaagagcatcgaccgcaagggcaacgagagcaactgctgcatcacggggaacaac
ttctcctggtgtctgcagtggaacggacgcaccttctccgcctggcacagcgacgtggag
atccccctcagcgtggagatccccctcagcgtggagaagttcattcgtgtcggcgtttat
ttggactacaggaaaggccttctttctttctacggtgtggacgacaccatgacgcccatc
caccagtacaaggccgagttcctggagcctctttacccggctttctggttgtccaagaag
gagaatctagttgctttggtggccccgggagagccgttgcaggtcaaaagcccctctccg
tccaccccacctgagaatagagctactgtttccaacactgcagcacagcaatga
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