Perca flavescens (yellow perch): 114553028
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Entry
114553028 CDS
T07494
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114553028 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114553028 (usp47)
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114553028 (usp47)
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114553028 (usp47)
Ubiquitin system [BR:
pflv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114553028 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
114553028
NCBI-ProteinID:
XP_028429926
LinkDB
All DBs
Position
1:complement(24023981..24045583)
Genome browser
AA seq
1387 aa
AA seq
DB search
MEMVPSQENQFVPKEGVFWSCRQNIFDEMKKISQIQNAAEEPRVLCIIQDITSAKTVNER
LTLNLPASTTLCKLYEDVARKAGYVKATFDLAWGNTPDMVPLDHSSEMSLSDSGFEPGGK
RNFLQLTDKDGEQPQIASDESGTADSSGLDDSSQERIIGPLPRDGAAGCSGDYSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEETEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYSSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHLPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPDELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERVL
KPKSLLTFELFSVMVHSGSAAGGHYYACIKSYSDGQWYSFNDQHVSKITQDDIRKTHGGS
SGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLAAEDFPEHIKSLVQKEKESEEQEKRQ
REIERNTCKIKLFCVHPVKLMMESKLEVHKDKTLREATEMAYKLMELEGLVSLDCCRLVK
YDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRKPEQAFQPYKPGEVMVKVHV
VDLKSETIASPISVRAYLNQTITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFVESSESTDHQVAFTDSVLWKLLDRHGNTIRLLVLLPEQSPGTLANRT
LCQNVGGDCDVPLEGSKGNRKSVEAILEESPEKLKNLLLEQQQQQQQGSSPSDSQKSSET
SDFEHIESPTQEADSNSSLCVAADNRELENRIRATAGGSSSASSDPENHFACEERSDSEV
NNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDT
AEEDSGTDSEYDDNGKSKAEAQYLYFRAEPCSQDDSSSETQKCLVVHVDKRITLAAFKQN
LEPYVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVY
QLLVNEPEPCKFLVDTVFAKGMTVRQSKEELLPQLKEQCKLDLSIDSIRLRKKTWKNPGT
VFLDYHVYEEDISISSNWEVFLEVLNEPEKMKSMSQLAVLTRRWRPAAMKLGPFQEVILE
SSSVEELKEKLSEMSDVPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYI
CDDGAVVFYRDSTEEPMELSEEERNELIKKESSRLLKTGHRVSYSPRKEKALKIYLDGGP
ARDPVQD
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagccaggagaaccagttcgtacccaaagagggtgtgttttggagt
tgcagacagaatatttttgatgagatgaagaagatttctcagatccaaaatgcagctgag
gagcccagagtgctgtgtatcattcaggatatcaccagtgcaaagacggtcaatgagagg
ctgaccctcaacctgcctgcttcaaccaccctctgcaaactatatgaagatgttgcccgc
aaagctggatatgtgaaagccacttttgaccttgcttggggaaatacgcccgacatggtg
ccactggaccacagcagtgagatgtccctctcagattctgggtttgagcctggcgggaag
aggaatttcctccagctcacagacaaagatggagagcagccccagattgcatcggatgag
tcgggaacagcagacagcagtgggctggatgacagttcccaggagcggataatcgggccc
ctaccgagagacggcgctgcaggctgcagtggtgactacagcagtccgtcttactcctac
tcatccatcctcaacaaatctgatacgggttacgtgggcttggtcaaccaagctatgacc
tgctatttgaacagtcttctacaaacgctgttcatgaccccggagttcagaaatgcactc
tacaactgggagtttgaggagactgaagaggatccagtcaccagtataccctaccagctg
caaaggctgtttgttctgctgcagactagtaagaaacgggcgatcgagaccactgatgtg
acgcgcagctttggctgggacagcagcgaagcttggcagcagcatgacgtccaggagcta
tgcagggtcatgtttgatgccctggagcagaagtggaagcagacagagcaggctgacctg
atcaaccagctgtaccaggggaagctgaaggattatgtccgttgtctggagtgtggctat
gagagctggaggattgatacttacctggacatccctcttgtaatcagaccctttggagcc
agccaggcctacagcagtgtggaagaggctctgcaggcattcattcaaccagaaactctt
gacgggcccaaccagtacttctgtgaacgctgcaagaagaaatgtgacgcccggaagggt
ctgagatttctgcacttaccctacctgctgacactacagctgaagcggtttgattttgac
tacaccactatgcatcgcatcaagcttaacgaccgcatgactttccctgatgagctcgac
atgagtccatttatcgatgtggaagatgagaagtcacctcagacagagagctgcactgat
agtggagcagagaatgaaggcagttgccacagcgaccagatgagcaacgacttttccacc
gatgattgtgtggatgagggcatctgcttggacagcaccggcagcacagagagggtgttg
aagccaaagagtttactgacctttgagctgttctccgtcatggtccattctgggagcgct
gcaggtggccactactacgcctgcatcaaatcctacagtgatggccagtggtacagtttt
aatgatcagcacgttagcaagatcacccaagatgatatcaggaagacacatggcgggtcc
tcagggagcagaggctattattccagtgcctttgcaagctctacaaatgcatatatgctt
atttatagattgaaagatccctcgaggaatgcaaagtatttagctgcagaagacttccca
gagcacataaagagtttggttcagaaggagaaagagtctgaagagcaggaaaagcgacag
agggagattgagcgcaacacttgcaagattaagcttttctgcgtgcatcctgtaaagctg
atgatggagagcaagctagaagtacacaaggacaaaactctcagagaagcaacagaaatg
gcctacaagctgatggagctggagggattggtgtctctggactgctgccgcctggtaaag
tacgatgagttccacgagtacctggagcgctcttatgaaggggaggaggacacaccgatg
ggcctgctgctgggaggagtcaagtcctcatatatgtttgacctgctgcttgagacccgc
aaaccagagcaagcgttccagccttacaaacctggagaggtaatggtgaaggtccatgtt
gtggatctaaagagtgagaccatcgcctctccaatcagtgttcgggcatacttgaaccag
accatcactgaattcaaacagcttattgcacaggctacagggctatctgccgaaaccatg
cgcgtggtcctggagcgctgctataatgacctgcggctcctgtatgttccaaacaagaca
ctgaaagctgaggggttcttcaggagtaacaaggtttttgtagagagctctgagtcgacc
gatcatcaggttgcttttactgactcagtcttgtggaaactgttggatcgtcacggaaat
acgatccggctgttagtcttactgcctgagcagtctcctggtaccttggccaacagaact
ctttgccaaaacgtaggaggtgactgtgatgtgccccttgagggttcaaaaggtaacagg
aaatctgtagaggcaatcctcgaggagagcccagaaaagttaaagaatctgttgctggag
cagcagcagcaacagcagcaaggctccagccccagtgacagccagaaaagctctgaaacc
agtgactttgaacatattgaaagcccaacccaggaggctgactcaaactcttcactctgt
gtggctgcagacaacagagagttagagaaccggatcagggccacagcggggggcagcagc
agcgcctcctctgaccctgagaaccactttgcctgtgaggagcgctcagactctgaggtg
aacaatgaccgcagcaccagctcagtggacagcgacatcctgagctccagccacagcagt
gacacactctgcaatgcagacagcgggcccatacagctggccaatggcttggactcgcac
agcatcacaagtagccgtcgctccaaagcccatgagggcaaaaaagagacctgggacact
gctgaagaagactctggaacagacagcgagtacgacgacaatgggaagagcaaggcagag
gctcagtacctgtacttcagagcagagccttgttctcaggatgactcctcgtcggaaaca
caaaaatgtttagtggttcacgtagacaagagaataacattagcagcatttaaacagaac
ctggagccctacgtgggtgtcacctccacccagttcaaggtgtttcgggtgtacgccaac
aaccaggagtttgagagtgtacggctcaacgaaacgctctcatcgttctctgatgataac
aagataactattcgtctaggaagagcactgaaaaagggtgaatacagagtgaaagtgtat
caactactagtgaatgaaccagagccctgcaagttcctcgtggacacagtgtttgccaag
ggcatgactgtcagacagtctaaagaggagctgctccctcagttgaaagaacagtgtaag
cttgaccttagcattgacagcattcgtctcaggaaaaagacgtggaagaacccaggaacg
gtgtttctggactaccatgtctatgaagaagacatcagcatctcctctaactgggaagtt
ttcctggaagttctcaatgaaccggagaagatgaagtccatgtcgcagctcgctgtcctg
acccggagatggagacccgctgcaatgaagctggggcccttccaggaagttattctggag
agcagcagtgtagaagaactcaaggagaagcttagtgaaatgagcgatgttcctctcgaa
aacctggagtttgcaaagggtagaggaacctttccttgtgatatatctgtgttggagatc
catcaggatttggactggaaccctaaggtgtcaactctgaacgtatggcctctgtacatc
tgtgacgacggagctgtggtcttctacagggacagcacagaggagcctatggagctgtcg
gaggaggagcgcaatgagctgattaagaaggagagcagccgcctgctcaagactggccac
cgtgtcagctactcgccacgcaaggagaaggccctcaagatctacctggacggaggccct
gccagggacccggtgcaggactga
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integrated database retrieval system
