Perca flavescens (yellow perch): 114555203
Help
Entry
114555203 CDS
T07494
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
pflv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114555203
09124 Replication and repair
03420 Nucleotide excision repair
114555203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114555203
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114555203
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114555203
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114555203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
114555203
NCBI-ProteinID:
XP_028433229
LinkDB
All DBs
Position
5:7950651..7962860
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LHVVIDCSRSMEDQDLKPNRLTSTLKLLETFVDEYFDQNPISQLGIITTKNKRAEKLTDL
SGNPKKHTAALKKAVDTVCLGEPSIYNSLNLAIQTLKHMPGHTSREILIILSSLTTCDPA
NICELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVIPPP
ASSSSECSLIRMGFPQHIIAALTDQDAKPSFSMSHLDSSSAPGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFIESPVEEFQEDRFCQACQGELKDKSIFTC
PSCRSVFCVECDLFIHDLLHCCPCCIHSQSSP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagccaagcgctgggaagggggctatgagaggacatgggag
gtgctgaaggaggacgaatctggctcactaaaagccacagtggaagagatcctgttccag
tccaaaagaaaaagggtgatagagagccatggacaagtaaggcttggaatgatgcggcac
ctccatgtggtgattgactgttcaagaagtatggaagaccaggacttgaaaccaaaccgc
ctcacctctactctgaagctgttggaaacttttgttgatgagtattttgaccaaaacccc
atcagtcagctaggcattatcaccacgaagaataaaagggctgagaagcttactgatctg
tcaggaaatccaaagaagcacactgctgctctgaagaaagcagtggacactgtgtgttta
ggagagccatccatatacaattctctcaacctggccatacagaccctcaagcacatgcct
ggacatacaagccgggagatcctgataatcctcagcagccttactacatgtgacccagcc
aacatctgtgagctgattaagaccctaaagtctctgaaagtgcgggtgtctgtaatcggc
ctgtcagcagaggtcagggtgtgtacagtattgaccagggagacgggcgggtcgtaccac
gttatcctggatgagagccacttcaaagagctgctgatgctgcatgtcatacctcctcca
gccagttcctcatctgaatgctctttaatacgcatgggttttcctcagcacatcatcgcc
gctctgactgaccaggatgccaagccttcattcagcatgtctcatctggacagcagcagt
gcaccaggtctgtctctgggaggatacttctgcccgcagtgccacgccaagtacacagag
cttcccgtagagtgtaaagtctgtggtttgactctggtgtcggctccccatctcgccaga
tctttccaccacctcttccccctccaagcctttatagagagtcctgtggaggagtttcaa
gaagacaggttctgtcaagcttgtcaaggggaactgaaagataaaagtatattcacctgt
ccatcatgtcgcagtgtgttctgtgtggagtgtgatctcttcatccatgacttgctacac
tgctgcccttgctgtattcacagtcagagctccccctga
DBGET
integrated database retrieval system
