Perca flavescens (yellow perch): 114560828
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Entry
114560828 CDS
T07494
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114560828
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114560828
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
114560828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
114560828
NCBI-ProteinID:
XP_028442277
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All DBs
Position
8:complement(18545319..18685943)
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AA seq
900 aa
AA seq
DB search
MCADCPTPYAEKDPIGMKSQTELHTGHRGEGVCKKGCGLLLSCEDVNRGDHCCVDALRTV
TDALEARSATLEHETRMARLRWNRREQSLLAQVSTLQNEAQLSALKYQRRLHQYMLHISS
IAEQVTGYYKRDVRTVADTQSQTSDIAAEGTPQEQLNATEVNGKELSKSNHEETVEAFRA
AKDPVVVQVIRRTPSGRPHGPPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPF
LLSDSCHSLHTMDQDYYEGTGYLSPVQADGERTEEFEYEEVELCRLNSQEKLGLTLCYRT
DEEEDVAIYVSEISPNSIAARDGRIREGDRILQINGQDVQDREEAMAALSNDESRNIVLL
VARPEMQLEEAWLDDEHSEFLEQLKMEMLEEQQREEMELAALQEEQENEQRAEDDKPTCS
TLPHHKDSVLSIKDRMESSEHNVLAHIQRRLSQCLRDNRDTHHATSSMRLEDKEDEDDDE
TEGDRFQQLLELKCQIRNSGEYDLFYSRRSTIECNMGEQGGVQHELRMLNEELRSIELEC
QNIMQAHNLRKGQQSPSTGHSAPSTKNQSFHRSDPSRGKLADINERLEKSDKDSSSAYNT
AESSRSTPLAMDRSPEHSLQRMVSLTNQRNLCSSLATGSSLSPSPIPACLASVPGEGSSH
EYSNPSESNQTTQAEEESRGKLKPHASHIPYFSPSHSSQQRQVNIPAHARHYQSYMQLIQ
QRSAVEYAQSQLSLLSVCKEPQRPNNEPKMEWKVKIRSDGTRYITKRPVRDKILRERALK
IKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRKRREFMQRSRLESLKENPQ
SSSEGRKEVSIIELSQKKMMKKRNKKILDNWMTIQELMTHGTKAPEGAKVHNAFLSVTTV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctgattgcccaactccttacgcggaaaaggacccaatcgggatgaagtcgcaa
acagagctccatacgggccatcgtggtgaaggtgtttgtaagaaaggatgcgggctcctg
ctgtcctgtgaggatgttaacagaggggaccactgttgtgtggacgcgctgcgcactgtc
accgatgcgctggaagcaagaagcgcaactttggagcatgaaacccggatggcgaggctc
aggtggaacaggagggagcagtccctgttagcccaggtgtcaactctgcaaaacgaggcc
cagctatcggctctcaagtaccaacggagactgcaccaatacatgctgcacatcagcagc
attgcagagcaggtcactgggtactacaagagagatgtgagaacagttgctgacacgcag
agccagacatcagatatagcagcagagggaacgccacaggagcagctcaacgcaactgag
gtgaatgggaaggagttgtccaagtccaaccatgaggagactgtggaggcatttcgggct
gccaaggaccccgtcgtggtgcaggtcatcaggcggacccccagcggccgcccccatggc
ccccctcaggaaatccatgtggtggatgtgtgcactcagaccgacatcacctttgaacac
atcatggcgctggcaaagctccggccttcgacccctcctgtgcctgacgtctgtccattt
ctgctctctgacagctgtcattctcttcatacaatggaccaggattactatgaagggaca
ggttacctctcccctgtacaggctgatggagagaggacggaggagtttgagtatgaggaa
gtggaattgtgtcgactcaacagccaagagaagttggggctaactctgtgctacagaaca
gatgaagaggaggatgtggccatctatgtcagtgagatcagtccaaacagcatcgctgcc
agagatggccgcatcagagagggggatcgcattttacagattaatggccaagatgtacaa
gacagagaggaagcaatggctgcactctccaatgacgagagtaggaacatcgtactgctg
gttgccagacctgagatgcagctggaggaggcctggctggatgatgagcacagtgagttc
ctggagcagctaaagatggaaatgttggaggagcagcagagagaggagatggaattggct
gccttacaggaggagcaggagaatgagcagagagcagaagacgacaagcccacctgctca
acactccctcatcataaagatagcgtactgagtataaaagacagaatggagagctcagag
cataatgtcctggcacacatacagagacgcttgtcccagtgcctgagagacaatcgggac
acacaccatgccaccagctccatgcgactggaggacaaagaggatgaggacgatgatgag
acggagggtgatcgtttccagcagctcttggagctgaagtgtcagatacgtaacagcggt
gagtacgatctgttctacagccgccgcagcaccattgagtgcaacatgggagagcagggc
ggtgtacaacatgagctacgtatgctcaatgaggaactgcgcagcatcgaactggaatgt
cagaacattatgcaggcccataaccttcgtaagggccagcagtctccctccacaggccac
tctgcaccctcaaccaaaaaccaaagcttccatcgaagtgacccctcaaggggtaagctg
gctgacattaatgagaggctggagaaatcagacaaggacagctccagtgcctataacacg
gcggagagttcacgaagcactcctctggcaatggaccgctcgccggagcactcgctccag
aggatggttagtctcaccaaccagaggaacctctgcagcagccttgccactggttcttct
cttagcccaagccccatcccagcatgccttgcttcagtcccaggggaaggcagcagccat
gaatacagcaatccttctgagtcgaaccagacaactcaggctgaggaggagagcaggggc
aaattaaagccacatgcttcccatattccttacttctctccatcccacagttcccagcag
aggcaggtcaacatcccagcacatgcccgccactaccagagctacatgcagctgatccag
cagcgctcagctgtggagtacgctcagagccagctcagcctgctcagtgtctgcaaagag
cctcagaggcccaataatgagcccaagatggagtggaaggtcaagatccgcagcgacggc
acacgctacatcaccaagaggcctgtgagagacaagatcctgagggagcgagccctaaag
attaaagaggagcgtagtgggggaatgaccactgatgatgatgcaatgagtgaaatgaag
atggggaggtactggagtaaagaggaaagaaagcagcacctggtcagagcaaaagaacag
aggaaaagacgagagttcatgcagcgtagccggctggaaagcttgaaggagaaccctcag
agcagcagcgagggtcgcaaggaagtcagcattatagagctcagccagaagaagatgatg
aagaaacgcaacaagaagatcctggacaactggatgacgatccaggagctgatgactcat
ggtactaaggcccctgagggagccaaggtgcacaacgccttcctatcagtcactactgta
taa
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