KEGG   Perca flavescens (yellow perch): 114564341
Entry
114564341         CDS       T07494                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    114564341 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pflv03400]
    114564341 (rev1)
DNA repair and recombination proteins [BR:pflv03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    114564341 (rev1)
SSDB
Motif
Pfam: IMS IMS_C REV1_C BRCT_2 POLH-Rev1_HhH BRCT IMS_HHH UBM LIG3_BRCT PTCB-BRCT HHH_5 Cdd1 DNA_pol_lambd_f BAF
Other DBs
NCBI-GeneID: 114564341
NCBI-ProteinID: XP_028447409
LinkDB
Position
11:16632762..16645044
AA seq 1422 aa
MSRDGWTKKRANDSGDNGWAESGGYMAAKVSKLEEQFKLDAPREKQKDGSCSNIFSGVAI
YVNGYTEPSADELRRLMMLHGGQFHMYYSRSKTTHIIANNLPNSKIQELKGEKIIRPEWI
PDSIKAGRLLPYFQYQLYTKQKGPLFPGTTLRQTSEMAGPSHGLLQPSIHQKLHLPQGSI
QHSVLNHDQSTSNSVPNPSHSGLYQGNIQPQSIQQSSAVCFINQQPSHLASTYLNTDPRH
RSPLHTHLLSNPSPTKHPHKPQQSAVQTANSNLQHQRASQPQPQNNSSCNSARSGCKEVE
IKINRLLQNSLDVMSPSKMNEIQDCGKGDPLPQVVKEAHLTNGHTHLVNGALKPEDLSPV
TDEHSVDNEWPPCRVKSSDDKPQSPPVQFQSKPDPYEFPHSPPKQSDQSPVFLKQSNSHG
ANEQRPKPPPPTYQEAIKATESHLLPKQLQQSCQVDSNPEKTLSPASRSLSHTPIRLNGS
HHNAFSSDPASLNTTNVTAKPDPPTEKVLSPSKSSAQLLAQTGGLISEFYSHSRLHQIST
WRSSFSEYVNELHGKRKAVGGASFPGKDRLRKSVAQRSTDSRGTSAPTSVKSCILHVDMD
CFFVSVGIRHRPELRGKPIAVTSNRGQGRVPLRPGAHPQLEQQYYQRKHTHPQPERADED
LHRSPSQESPDSHANGVDQAAATLSMAEIASCSYEARQAGVRNGMFFGKAKQLCPSLQSV
PYDFEAYKEVALTMYETLAGYTHDIEALSCDEVLIDGSALLTELGSNPEDLASAIRADIK
EKTGCCASVGMGSNILLARLATRKAKPDGQYLLKSEEVDDFIRDLPVTSLPGVGPVMGKK
LAAMGVRSCGDLQQVSLSQLQKKFGPRTGQTLFRFCRGLDDRPVRYEKERKSVSAEMNYN
IRFTTVDEAESFLTNLSMEVQKRLQEAGLRGRRVTLKVMVRKVGAPLESAKYGGHGICDN
LARTVMLAQSTDSGQLIATAVIKLFHAMKLQVQDMRGVGIQVQLLDGHRSVPQDSSGPGT
RSIKEMLLGSGSARSSHGDAADNSTHQEKASSTTGPSSRSSPGPLSSPEPVPGTSRDQQA
GRQTPKHSRARLNFSIEVPSPSQVDHSVLAALPADLREQVEQSWTNRDGRASNRRSPSPR
PAAPLPQPPSLKSRPTSPLRPPVSGPALYTPPVGTLLLQIPNQPDSPGIVLELPNFSQVD
PDVFAALPKELQDELKSSYNRVINVQPQAKISVEQKNPLLQLKQSGLGVGIGRVKRRYKR
KNAVSPVKKGPSPLKRRHTTNSPAKTLPPPMKSRETINILKTENCPSTSTSKPDIPESLS
KFIPRPSPVLAGAYDLTDIKTLLREWVTTITEPMEEDILQVVKYCTDLIEDKDLEKLDLI
IKYMKRLMQQSVESVWSMAFDFILDNVQVVVQQAYGSTLKVV
NT seq 4269 nt   +upstreamnt  +downstreamnt
atgagccgagatggatggacaaagaagagagccaatgacagtggtgacaatggttgggct
gaaagtggcggctatatggctgcaaaagtttctaagctggaggagcagtttaaactcgat
gcccccagagagaaacaaaaggatggttcatgctccaatatttttagcggtgtggccatc
tatgtcaatggatacacagagccaagtgcagatgagctacgcagactaatgatgttgcat
ggtggccagttccacatgtactactctcgctccaagaccacccacatcatcgccaataac
ttgcccaacagcaaaattcaggagctcaaaggggaaaagatcatcaggccagagtggatc
cccgacagtatcaaggctgggcgtctcctgccttacttccagtaccagctgtacactaaa
cagaaaggcccactcttccctggcacgactctgcgccagacgtcagagatggcaggaccc
agccatgggctgcttcagccgagcatccatcaaaagcttcatctgccacagggcagcatt
cagcactctgtactcaaccatgaccagtccacatccaactctgtccctaaccccagccac
agtggactttaccaaggcaacatccaacctcagtccatccagcaaagttctgcagtttgc
ttcattaaccaacaaccaagtcacttagcatccacttacctcaatacagatcccagacac
agaagccctttgcacacccacctgctgtctaacccaagccccacaaagcacccccacaag
ccccaacagtctgctgttcaaacagctaattctaatctccagcatcaaagagctagccaa
ccacaacctcagaacaactcttcttgcaacagtgcccggagtggctgcaaggaagtggaa
ataaaaataaacagattattacagaactcattggatgtgatgagcccttcaaaaatgaat
gaaatacaagattgtggcaaaggagatcctctcccgcaggtggtgaaggaagcacatctg
acaaatggacacactcaccttgttaatggtgccttaaagccagaggacctgtctcctgtt
acagatgaacactctgttgacaatgaatggcctccatgcagagtcaagagttcagatgat
aaacctcagagtcctccagtacagtttcagagcaaacctgacccttatgagtttccccat
agtcctccaaaacaatctgaccagtctcctgtctttctaaagcaatccaattcacatgga
gccaatgagcagagacctaaacctccaccacccacctaccaggaggctataaaagccact
gagagccacctactcccaaaacagctccagcaatcctgtcaagttgattcaaatccagaa
aagactctgtcacccgcatctcgctctctttcacatactccaattcgactgaacggaagt
caccacaatgccttttcgtctgaccctgcctcacttaacacaaccaacgtaacagccaaa
ccggatcctcccactgaaaaggttttatcaccatctaagtcgtcagctcagctgctggca
cagacaggcggtttgatctctgagttctactctcactcacgtttacaccagatctccaca
tggaggtccagcttttcggagtatgtcaatgaactgcacgggaagcgaaaagcggtggga
ggggcctcctttcctgggaaagaccgactgaggaaatctgtggcccagcgctcaacagac
agtcgaggaacgtcagcacccacaagtgttaaatcttgtattcttcatgtggacatggac
tgcttctttgtgtctgtggggatccgacatcggccagagcttagagggaagcctatagct
gtgaccagtaaccgtggacagggcagagtgcccctgaggcccggggcccaccctcagctg
gagcagcagtactaccagaggaaacatactcatccacaacctgagagggcagatgaggat
ctacacagaagtccttcacaagagagtcctgactcccatgctaacggagtggaccaggct
gctgccactctctcaatggcagagattgcatcctgcagttatgaggctaggcaggctggt
gtgagaaatgggatgttttttggcaaagcaaaacagctgtgtccctcgctgcagtctgtc
ccatatgattttgaggcctataaagaggtggcgctcaccatgtatgagactctggcaggt
tacacccatgacattgaggctctgagctgtgacgaagtgttgatagacggttctgctctg
ctaaccgagttgggcagcaacccagaagatctggctagtgcaatcagagcagacatcaag
gagaaaaccggatgctgtgcttcagtgggcatggggtccaacatcctgttggctcggttg
gcgacccgtaaggccaagccagatggccaatacttgttaaagtctgaagaagtggatgat
tttatcagggacctgccagtgaccagcttaccaggcgttgggcctgttatgggcaaaaaa
ctggctgctatgggtgtgaggtcatgtggggacctccaacaggtgtctctgtctcagcta
caaaagaagtttggaccccggaccggacagaccctcttccgcttctgcagggggctagat
gaccgacctgtccgctacgagaaggaaaggaagtccgtctcagctgagatgaactacaac
attcgctttactacggttgatgaggcagagtctttcctgactaacttgtccatggaggtg
caaaaacgtttacaagaagcagggctgcgtggacgcagagttactcttaaggtcatggtt
cgcaaggttggagcgccactcgaatctgctaaatacggcggtcatggcatatgtgataac
ttagccaggactgtgatgctcgctcaatccactgacagtggtcagctgatagccactgca
gtcatcaagctgttccacgccatgaagttgcaggttcaggacatgagaggagtcggcatc
caggttcagcttcttgacggacaccgctctgtcccccaggactcttcgggccccgggaca
cgctccatcaaagaaatgttgctaggcagtggaagtgcaagatccagtcacggagatgct
gctgacaacagcacacatcaggaaaaggcttcgtcaaccacaggcccatcatctcgctcc
tctccaggtcctctgtcctctcccgagccggtcccagggacgagcagagaccagcaggca
ggcagacaaactccaaaacattctcgagcccgtctcaacttcagcattgaggttccctcc
ccttcacaggtggatcattctgtgttggcggcgttgcccgcagatctgagagaacaagtg
gagcagtcatggactaatcgggatgggagagcaagtaaccgtcggtcacccagtccacgg
cccgctgctcctcttccacagcctccatctctaaagtctcgtcctacctcccctcttcgt
cctcctgtctctggtcctgcactctacactccacccgttggcacattgcttctacagatt
ccaaaccagcccgacagtccaggaattgtgctggaactaccaaacttctcacaggttgat
ccggatgtatttgctgcccttcccaaagagctccaggacgaactgaagtcttcctacaac
cgcgtaataaatgtccagccccaggcaaaaatatcagtggagcagaagaatccactgttg
cagctaaaacagtcaggacttggagttggcattggtcgagtgaagcggcgctacaagaga
aaaaatgccgtgagccctgttaaaaaaggtccttcccctctaaagaggcgtcacacaact
aacagcccagccaaaaccctaccacctcctatgaaatcacgggaaacaataaacatatta
aagactgaaaattgtccctccacatcaacctcaaaaccagacatcccagagtctctgtcc
aaattcattcctcgcccttctccagtgttggccggagcctatgacctgacggacattaaa
accctcctacgggaatgggtcaccaccataacagaacccatggaggaggacatcctgcag
gtggtaaaatactgcactgatctgattgaggataaagatctggagaagttggatctgatt
ataaaatatatgaaaaggctcatgcagcagtcggtagagtctgtttggagtatggctttt
gacttcatcctagacaacgtgcaggtggttgtgcagcaggcttatggtagcaccctaaaa
gtagtatga

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