Perca flavescens (yellow perch): 114565688
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Entry
114565688 CDS
T07494
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114565688
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114565688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
zf-RING_6
MRP-S31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
114565688
NCBI-ProteinID:
XP_028449682
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Position
12:complement(31336818..31338951)
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AA seq
578 aa
AA seq
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MAQRGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIQEFWDKEDKKKIHSCPQCREP
FTSRPVLVKNTMLSDIMEQLKKTGLQAAPADHCYAGAEDVACDVCTERKLKALKSCLVCL
VSYCDQHLQPHYNSSAFEKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQLICYLCPVDE
HKGHDTVSAAAERTERQKELEGSRQNIQQRIQDREKDVKLLQQEVEAINHSADKVVEDSG
KIFTELIRLLEKRSSDVEQQVRFQQKTEVSRAKEVQEKLEQEITELKRKDAEMTKLSDTE
DHNQFLHNYSSLSPLSESTSSIDIRPLRYFEDVTAAVSDARDKLQDRLRETWTDIYLAVI
EVDVILSNPQPDPTTRAQFLKYSREITLDPNTVHPQLWFSDRKATFMKREQSYSHHPDRF
SVNYQVLSEESLTGRCYWEVERTGGGVNVAVAYKNISRKGRANECGFGHNDKSWVLQCQE
NTFIFLYNNVQTYVSGPPSTRVGVYLDHIAGTLSFYSVSDTMTLLHRVKTTFTQPLYAGL
GVYYDYGDTAEFCKLKKTEVAPSCVCSATEAITARDVC
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagaggagttcagctggaccgggaaactttctcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgtatgaactgtattcaa
gagttctgggataaagaggacaagaagaaaatccacagctgccctcagtgtagggagccc
ttcacatcaaggcctgtactggtgaaaaacaccatgttatcagatataatggagcaattg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgagagaaaactgaaagccctcaagtcctgtctggtgtgtctg
gtctcttactgtgatcaacacctccagcctcattataactcctctgcgtttgagaaacac
aagctggtggagccctccaagaagctccaggaaaacatctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcagcagcttatctgttatctctgccctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaagagctt
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatcactctgctgataaagtagtggaggacagtggg
aagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtggagcagcag
gtcagattccagcagaaaactgaagtgagtcgagccaaagaggttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagatgacgaagctctcagacacagag
gatcacaaccagtttctacacaactactcctcactgtcaccactcagtgaatctacatcc
agcatcgatatccgtcctctgcgctactttgaggatgtgacagcagctgtgtcagatgcc
agagataaactacaggaccgtctaagagagacatggacagacatctatctggctgtgatt
gaagtggatgttatactgtcaaatccacaaccagaccccactaccagagctcaattctta
aaatattcacgtgaaatcacactggatccaaacacagtacacccacagctgtggttctct
gacagaaaagcaacattcatgaaaagagaacagtcttattctcatcacccagacagattc
tctgtaaactatcaggtcctgagtgaagagagtctgactggacgttgttactgggaggtg
gagaggacaggaggaggggttaatgtagcagtcgcatacaagaacatcagcagaaaaggg
agagcgaatgaatgtggatttggacacaatgacaaatcttgggtgttacagtgtcaggag
aacacttttatctttctttacaacaatgtccaaacttacgtctcaggtcctccatctacc
agagtaggagtgtacctggatcacattgcaggtactctgtctttctacagcgtctctgac
accatgactctcctccacagagtcaagaccacattcactcagccgctctatgctggactt
ggggtttattatgattatggagacactgctgagttctgtaaattgaaaaagacagaagtt
gctccttcctgtgtctgttcagccacggaggctatcactgctcgtgatgtttgttga
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