Perca flavescens (yellow perch): 114565689
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Entry
114565689 CDS
T07494
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114565689
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114565689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_6
U-box
zf-Nse
LMBR1
Motif
Other DBs
NCBI-GeneID:
114565689
NCBI-ProteinID:
XP_028449683
LinkDB
All DBs
Position
12:complement(31331899..31333647)
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AA seq
552 aa
AA seq
DB search
MAEKGVQLDQEIFSCSICLDLLKGPVTIPCGHSYCMNCIQEFWDEKEIYSCPQCRNTFTS
RPVLVKNTMLADLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKALKSCLVCLVSY
CAQHLHFHNGVARFKKHELVEPSKKLQENICSHHDEVMKIFCRTDQHCICSLCLMDEHKG
HDTVSAAAERTERQKELEVSQENIQQRIQDREKDVKLLQQEVEAINHSADKAVKDSKKIF
TELIRLMEKRRSNVEQKVRSQQETEVSRVKELQEKLEQEITELKRKDAEMKKISDTEDHT
QFLKNYSSLSPLSESTSSINLRPLSYFEDVTAAVSATRDILQDVLRDTWTNISLTVTKVD
VLLSQPEPKTRADFLKYSRELTLDPNTAHTQLLLSEVERKVTLTYNNQGYSSHPDRFSVN
YQVLSRESLTGRCYWEVAWTGGGVHVAVAYKNISRVGDPGEFGKNKKSWELRCVKNSYQI
WHNKVQTPVPGPWSSKVGVYLDHRAGTLSFYSVSDTMTLLHRVQTTFTQPLNAGLRLYYH
YGDTAEFCKLEV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaggagttcagttggaccaggaaattttctcttgttcgatctgtctggat
ctactgaagggtccggtgactattccctgtggacacagctactgtatgaactgtattcaa
gagttctgggatgagaaggaaatctacagctgtcctcagtgtagaaatactttcacatca
aggcctgtactggtaaaaaacaccatgttagcagatttagtggaggaactgaagaagact
ggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggagaaaattgaaagccctcaagtcctgtctggtgtgtctggtctcttac
tgtgctcaacacctccattttcataatggtgtggctcgattcaagaaacacgagctggtg
gagccctccaagaagctccaggagaacatctgctctcatcatgatgaggtgatgaagata
ttctgccgtactgatcagcactgtatctgttctctctgcttaatggatgaacataaaggc
cacgacacagtctcagctgcagcagaaaggactgagaggcagaaagagctcgaggtgagt
caagaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacag
gaggtggaggccatcaatcactctgctgataaagcagtgaaggacagtaagaagatcttc
actgagctgatccgtctcatggagaaaagacgctctaatgtggagcagaaggtcagatcc
cagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
actgagctgaagaggaaagacgctgagatgaagaagatctcagacacagaggatcacacc
cagtttctgaaaaactactcctcactgtcaccactcagtgaatctacatccagcatcaat
ctccgtcctctgagctactttgaggatgtgacagcggctgtgtcagccaccagagacata
ctacaggacgtcctgagagacacatggacaaacatctcactgactgtgactaaagtagat
gttttactgtcacaaccagagcccaagaccagagctgacttcttaaaatattcacgtgaa
ctcacactggatccaaacacagctcacacacagctgttattatctgaggtggagagaaag
gtaacattaacatataataatcagggttattctagtcacccagacagattctctgtaaac
tatcaggtcctgagtagagagagtctgaccggacgttgttactgggaggtggcgtggaca
ggaggaggggttcatgtagcagtcgcatacaagaacatcagcagagtgggggacccgggt
gaatttggaaaaaacaaaaaatcctgggagttaagatgcgtcaaaaacagttatcaaatt
tggcacaacaaagtccaaactcccgtcccaggtccttggtcctccaaagtaggagtgtac
ctggatcacagggcaggtactctgtccttctacagcgtctctgacaccatgactctcctc
cacagagtccagaccacattcactcagcctctcaatgctggactacggctttattatcat
tatggagacacagctgagttctgtaaactagaggtgtga
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