Perca flavescens (yellow perch): 114566025
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Entry
114566025 CDS
T07494
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114566025
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114566025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
114566025
NCBI-ProteinID:
XP_028450168
LinkDB
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Position
12:complement(31318369..31320367)
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AA seq
544 aa
AA seq
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MGEETSNSICLDLLKGPVTIPCGHSYCMNCIQEFWDEKKIYSCPQCRNTFTSRPVLVKNT
MLADLVEELKKTGLQAAPADHCYAGAEDVACDVSTGRKLKALKSCLVCLVTYCAQHLHFH
NGVARFKKHKLVEPSKKLQENICSHHDEVMKIFCRTDQQRICSLCLMDEHKGHDTVSAAA
ERTERQKELEVSQQNIQQRIQDREKDVKLLQQEVEAINLSADKAVKDSKKIFTELIRLME
KRHSNVKQQVRFQQETEVSRVKELQEKLEQEITELKRKDAEMKKISDTEDHNQFLHNYSS
LSPLSESTSSIDIRPLSYFEDVTAAVSEVRDKLQDVLRDTWTNISLAVTQVDVLLSQPEP
KTRADFLKYSRELTLDPNTAHTQLLLSEVERKVTLTYNNQGYFSHPDRFSVNYQVLSRES
LTGRCYWEVAWTGGGVHVAVAYKNIGRVGDPGEFGKNEKSWELRCVKNSYQTWHNKVQTP
VPGPWSSKVGVYLDHRAGTLSFYSVSDTMTLLHRVQTTFTQPLNAGLRLYYHYGDTAEFC
KLEV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagaaacctcgaattcgatctgtctggatctactgaagggtccggtgactatt
ccctgtggacacagctactgcatgaactgtattcaagagttctgggatgagaagaaaatc
tacagctgtcctcagtgtagaaatactttcacatcaaggcctgtactggtaaaaaacacc
atgttagcagatttagtggaggaactgaagaagactggactccaagctgctcctgctgat
cactgctatgctggagctgaagatgtggcctgtgatgtctccactgggagaaaactgaaa
gccctcaagtcctgtctggtgtgtctggtcacttactgtgctcaacacctccattttcat
aatggtgtggctcgattcaagaaacacaagctggtggagccctccaagaagctccaggag
aacatctgctctcatcatgatgaggtgatgaagatattctgccgtactgatcagcagcgt
atctgttctctctgcttaatggatgaacataaaggccacgacacagtctcagctgcagca
gaaaggactgagaggcagaaagagctcgaggtgagtcaacaaaacatccagcagagaatc
caggacagagagaaagatgtgaagctgcttcaacaggaggtggaggccatcaatctctct
gctgataaagcagtgaaggacagtaagaagatcttcactgagctgatccgtctcatggag
aaaagacactctaatgtgaagcagcaggtcagattccagcaggaaactgaagtgagtcga
gtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgct
gagatgaagaagatctcagacacagaggatcacaaccagtttctacacaactactcctca
ctgtcaccactcagtgaatctacatccagcatcgatatccgtcctctgagctactttgag
gacgtgacagcggctgtgtcagaggtcagagataaactacaggacgtcctgagagacaca
tggacaaacatctcactggctgtgactcaagtggatgttttactgtcacaaccagagccc
aagaccagagctgacttcttaaaatattcacgtgaactcacactggatccaaacacagct
cacacacagctgttattatctgaggtggagagaaaggtaacattaacatataataatcag
ggttattttagtcacccagacagattctctgtaaactatcaggtcctgagtagagagagt
ctgaccggacgttgttactgggaggtggcgtggacaggaggaggggttcatgtagcagtc
gcatacaagaatatcggcagagtgggggacccgggtgaatttggaaagaacgaaaaatcc
tgggagttaagatgcgtcaaaaacagttatcaaacttggcacaacaaagtccaaactccc
gtcccaggtccttggtcctccaaagtaggagtgtacctggatcacagggcaggtactctg
tccttctacagcgtctctgacaccatgactctcctccacagagtccagaccacattcact
cagcctctcaatgctggactacggctttattatcattatggagacacagctgagttttgt
aaactagaggtgtga
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