Perca flavescens (yellow perch): 114566042
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Entry
114566042 CDS
T07494
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114566042
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114566042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
CALCOCO1
zf-RING_10
zf-RING_6
Gp58
RSS_P20
Motif
Other DBs
NCBI-GeneID:
114566042
NCBI-ProteinID:
XP_028450187
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Position
12:complement(34225633..34227447)
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AA seq
555 aa
AA seq
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MAQKGVQLDRETFSCSICLDLLKDPVTTPCGHNYCMNCIQSHWDEEDRKNIHSCPQCRQT
FTPRPVLLKNTMLADLVEELKKTGLQAAPADHCYAGAGDVACDVCTGRKLKAIKSCLMCL
MSYCDQHLQPHYDVPQLKKHKLVEPSKKLQENICSRHDEVMKIFCRTDQQLICYLCLMEE
HKGHDTVSAAAERTERQRELEGSQQTIQQRIQDREKDVKLLQQQAEAISLSADKAVEDSE
KIFTELIRLLEKRSSDVKQQVRSQQKSEESRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSPLSQSASSIHIHPLSCFEDLTAAVSEVRDKLQDVLREERTNLLLTGR
TDFSLSEPEPKTRTDFLQYSREIKLDPNTAYTHLLLSDGNRKATVMRQQQAYSSHPKRFT
IWPQVLSREVLTGCCYWEVEKMGNVSVAVAYKNISRAGGSTECGFGRNNKSWALDSSSYF
YYNNVRTPVSGPVSSRVGVYLDHSPGILSFYSVSETMTLLHRVQTTFTQPLYAGLRFNGL
FGSLNGDTAELCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggagaccttctcttgttccatctgtctggat
ctactgaaggatccggtaactactccctgtggacacaactactgcatgaactgtattcaa
agccactgggatgaagaggatcgtaagaacatccacagctgtcctcagtgcaggcagact
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctggagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccatcaagtcctgtttaatgtgtctg
atgtcttattgtgatcaacacctccagcctcattatgatgttcctcaattaaagaaacac
aagctggtggagccctccaaaaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagattttctgccgtactgatcagcagctaatctgttatctctgcttaatggaggaa
cataaaggccacgacacagtctctgctgcagcagaaaggactgagaggcagagagagctc
gaggggagtcaacagaccatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacagcaggcggaggccatcagtctctctgctgataaagcagtggaggacagcgag
aagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaaaagtgaagagagtcgagtcaaagagcttcaggagaagctcgag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatcagcatcc
agcatccatatccatcctctgagctgctttgaggacttgacagcggccgtgtccgaagtc
agagataaactacaggatgtcctgagagaggagaggacaaatctcttactgacaggaagg
actgatttttcactgtcagaaccagagcccaagaccagaactgacttcttacaatattca
cgagaaatcaaactggatccaaacacagcttacacacatctgttattatctgatgggaac
agaaaagcaacagtaatgagacaacaacaggcttattctagtcacccaaaaagattcact
atatggcctcaggtcctgagtagagaggttctgactggatgttgttactgggaggtggag
aagatgggtaacgtttctgtagcagttgcatacaagaatatcagcagagcaggggggtca
actgaatgtggatttggacgaaataacaaatcctgggctttagacagtagcagttacttt
tattacaacaatgtccgaactcccgtctcaggtcctgtgtcctccagagtaggagtgtac
ctggatcacagtccaggtattctgtccttctacagtgtctctgaaaccatgactctcctc
cacagagtccagaccacattcactcagcctctctatgctggactaaggtttaatggcttg
tttggatctttaaatggagacacagctgagttgtgtaaactgaaatag
DBGET
integrated database retrieval system
