Perca flavescens (yellow perch): 114567297
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Entry
114567297 CDS
T07494
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K04551
ubiquitin B
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
pflv04137
Mitophagy - animal
pflv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114567297 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114567297 (ubb)
04137 Mitophagy - animal
114567297 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114567297 (ubb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114567297 (ubb)
Ubiquitin system [BR:
pflv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
114567297 (ubb)
Exosome [BR:
pflv04147
]
Exosomal proteins
Exosomal proteins of breast milk
114567297 (ubb)
Exosomal proteins of other body fluids (saliva and urine)
114567297 (ubb)
Exosomal proteins of colorectal cancer cells
114567297 (ubb)
Exosomal proteins of bladder cancer cells
114567297 (ubb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Sde2_N_Ubi
Motif
Other DBs
NCBI-GeneID:
114567297
NCBI-ProteinID:
XP_028452146
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All DBs
Position
13:9753352..9758903
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AA seq
229 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaagaccatcaccctggaggtggagcccagc
gacaccattgaaaatgtcaaggctaaaatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaagaatccactctccatcttgtcctgcgtctgaggggaggcatgcagatcttc
gtcaagaccctcaccggcaagaccatcaccctggaggttgagcccagcgacaccattgag
aacgtgaaggccaagatccaggacaaggaaggcattccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaggag
tccactctccatcttgtcctgcgtctgaggggaggcatgcaaatcttcgtcaagaccctc
accggcaagaccatcaccctggaggtggagcccagcgacactattgagaacgtgaaggcc
aagatccaggacaaggaaggcattccccctgaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctctctgactacaacatccagaaagaatctactctccat
cttgtcctgcgtctgaggggcggtcaataa
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integrated database retrieval system