KEGG   Perca flavescens (yellow perch): 114567297
Entry
114567297         CDS       T07494                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K04551  ubiquitin B
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv04120  Ubiquitin mediated proteolysis
pflv04137  Mitophagy - animal
pflv04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    114567297 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    114567297 (ubb)
   04137 Mitophagy - animal
    114567297 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pflv04121]
    114567297 (ubb)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pflv04147]
    114567297 (ubb)
Ubiquitin system [BR:pflv04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   114567297 (ubb)
Exosome [BR:pflv04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   114567297 (ubb)
  Exosomal proteins of other body fluids (saliva and urine)
   114567297 (ubb)
  Exosomal proteins of colorectal cancer cells
   114567297 (ubb)
  Exosomal proteins of bladder cancer cells
   114567297 (ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL Sde2_N_Ubi
Other DBs
NCBI-GeneID: 114567297
NCBI-ProteinID: XP_028452146
LinkDB
Position
13:9753352..9758903
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctcactggcaagaccatcaccctggaggtggagcccagc
gacaccattgaaaatgtcaaggctaaaatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaagaatccactctccatcttgtcctgcgtctgaggggaggcatgcagatcttc
gtcaagaccctcaccggcaagaccatcaccctggaggttgagcccagcgacaccattgag
aacgtgaaggccaagatccaggacaaggaaggcattccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaggag
tccactctccatcttgtcctgcgtctgaggggaggcatgcaaatcttcgtcaagaccctc
accggcaagaccatcaccctggaggtggagcccagcgacactattgagaacgtgaaggcc
aagatccaggacaaggaaggcattccccctgaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctctctgactacaacatccagaaagaatctactctccat
cttgtcctgcgtctgaggggcggtcaataa

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