Perca flavescens (yellow perch): 114567720
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Entry
114567720 CDS
T07494
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114567720
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114567720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
Gp58
zf-RING_5
zf-RING_6
Prok-RING_4
zf-RING_10
DUF4455
MRP-S31
zf-RING_11
DUF445
DUF4192
Motif
Other DBs
NCBI-GeneID:
114567720
NCBI-ProteinID:
XP_028452628
LinkDB
All DBs
Position
14:complement(1917276..1919527)
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AA seq
555 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVAIPCGHSYCMNCIKSHWDEEDRKYSYSCPECRKT
FTPRPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAHKSCLQCL
ASFCEKHLQPHYESETFKKHKLVEPSKKLQENVCSRHDEVMKMFCRTDQQCICYLCSVEE
HKGHDTVSAAAERTERQKKLEGSRQTIQQRIQDREKDVKLLQQQAEAIDRAADKAVEDSE
KIFTELIRLLEKRSSDVKQQVRSQQKREESRVRELQEKLEQEITELKREDAELKKLSHTE
DLNQFLHNYPSLSPLSQSASSIHICPLSCFEDVTAAVSEVRDKLQDVLREKWTNVSLTGT
EVDVLLPPPEPKTRAGFLKYSREITLDPNTANTQLLLSEGNRKATLMRQQQSYSSHPDRF
TGWCQVLSRESLTGCCYWEVERRGGVYVAVSYKNIIRAGGSEECLFGQNDKSWSLDCYNN
SYTFWSNNVQTPVSGPGSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGLM
VYWFDGGSAELCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaactgtattaaa
agccactgggatgaagaggatcgtaagtacagctacagctgccctgagtgcaggaagacg
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactcaaagcacacaagtcctgtctgcaatgtctg
gcttctttctgtgagaaacacctccagcctcattatgaatcagagacattcaagaaacac
aagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggaggaa
cataaaggacacgacacagtctcagctgcagcagaaaggactgagaggcagaaaaagctg
gaggggagtcgacagaccatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacagcaggcggaggccatcgatcgcgccgccgataaagcagtggaggacagcgag
aagatcttcaccgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaaaagagaagagagtcgagtcagagagcttcaggagaagctggag
caggagatcactgagctgaagagggaagacgctgagctgaagaagctctcacacacagag
gatctcaaccagtttctacacaactacccctcactgtcacctctcagccaatcagcatcc
agcatccatatctgtcctctgagctgctttgaggacgtgacagcagccgtgtcagaagtc
agagataaactacaggacgtcctgagagagaagtggacaaacgtctcactgacagggact
gaagtggatgttttactgccaccaccagagcccaagaccagagctggattcttaaaatat
tcacgtgaaatcacactggatccaaacacagcaaacacacagctgttattatctgagggg
aacaggaaagcaacattaatgagacaacaacagtcttattctagtcacccagacagattc
actggctggtgtcaggtcctgagtagagagagtctgactggatgttgttactgggaggtg
gagaggagaggaggagtttatgtagcagtctcatacaagaatatcatcagagcagggggg
tcggaggaatgtttatttggacaaaatgacaaatcttggtcgttagattgttacaacaac
agttatacattttggtccaacaatgtccaaactcccgtctcaggtcctgggtcctccaga
gtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacattcactcagcccctctatgctggactaatg
gtttattggtttgatggaggctctgctgagttgtgtaaactgaaatag
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integrated database retrieval system
