Perca flavescens (yellow perch): 114570615
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Entry
114570615 CDS
T07494
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114570615
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114570615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-B_box
zf-RING_5
Gp58
U-box
zf-RING_6
Prok-RING_4
zf-RING_10
zf-RING_11
WDCP
PRP1_N
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
114570615
NCBI-ProteinID:
XP_028456772
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Position
16:30887752..30908116
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AA seq
550 aa
AA seq
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MAQKGVELVQEAFSCSICLDLLKDPVTTPCGHSYCMNCIKSHWDGEDHKSSYSCPQCRKT
FTPRPVLLKNSMLADLVEELKKTGLQAAPADHCYAGAEDVACDVCIGRKLKAHKSCLQCL
ASFCEKHLQFHYESETFKKHKLVEPSKKLQENVCSRHDEVMKMFCRTDQQLVCYLCSEEE
VSAVGETAERQRELEGSRQNIQQRIQDREKDVKLLQQQAEAINLSADKAVEDSEKIFTEL
IRLLEKRSSDVKQQVRSQQKREESRVRELQEKLEQEITELKRKDAELKKLSHTEDHTQFL
HNYPSLSPLSQSASSIHICPLSCFEDVTAAVSEVRDKLQDVLREKRTNVSLTGTEVDVLL
PPPEPKTRAGFLKYSREITLDPNTAYTWLLLSEGNRKATVMSEQQSYSSHPDRFTEEWQV
LSRESLTGCCYWEVERRGRGVDVAVTYKNISRAGASDECGFGRNDKSWALYCKNNSYTFW
SNDVQTPVSGPESSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGLALVGYT
GVSAEFCKQK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagttgagctggtccaggaagccttctcttgttccatctgtctggat
ctcctgaaggatccggtgactactccctgtggacacagctactgcatgaactgtattaaa
agccactgggatggagaggatcataagtccagctacagctgtcctcagtgcaggaagacg
ttcacaccgaggcctgtactgctgaaaaactccatgttagcagatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcattgggaggaaactcaaagcacacaagtcctgtctgcaatgtctg
gcttctttctgtgagaaacaccttcagtttcattatgaatcagagacattcaagaaacac
aagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtg
atgaagatgttctgccgtactgatcagcagcttgtctgttatctctgctctgaggaggaa
gtctccgctgtgggagagacagctgagaggcagagagagctcgaggggagtcgacaaaac
atccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggag
gccatcaatctctctgctgataaagcagtggaggacagcgagaagatcttcaccgagctg
atccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaa
agagaagagagtcgagtcagagagcttcaggagaagctggagcaggagatcactgagctg
aagaggaaagacgctgagctgaagaagctctcacacacagaggatcacacccagtttcta
cacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatctgtcct
ctgagctgctttgaggacgtgacagcagccgtgtcagaagtccgagataaactacaggac
gtcctgagagagaagaggacaaacgtctcactgacagggactgaagtggatgttttactg
ccaccaccagagcccaagaccagagctggattcttaaaatattcacgtgaaatcacactg
gatccaaacacagcatacacatggctgttattatctgaggggaacaggaaagctacagta
atgagtgaacaacaatcttattctagtcacccagacagattcactgaagagtggcaggtc
ctgagtagagagagtctgactggatgttgttactgggaggtggagaggagagggagagga
gttgatgtagcagtcacatacaagaatatcagcagagcaggggcgtctgatgaatgtgga
tttggacgaaatgacaaatcttgggcgttatattgtaaaaacaacagttatacattttgg
tccaacgatgtccaaactcccgtctcaggtcctgagtcctccagagtaggagtgtacctg
gatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccac
agagtccagaccacgttcactcagcccctctatgctggacttgcgcttgttggttatact
ggagtctctgctgagttttgtaaacagaaatag
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