Perca flavescens (yellow perch): 114571166
Help
Entry
114571166 CDS
T07494
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114571166
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114571166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
U-box
PRY
zf-RING_2
ISG65-75
DUF5082
Golgin_A5
Perilipin
Exonuc_VII_L
Glutaredoxin2_C
Gp58
TMPIT
DUF948
DENND11
Baculo_PEP_C
Relaxase_C
Motif
Other DBs
NCBI-GeneID:
114571166
NCBI-ProteinID:
XP_028457806
LinkDB
All DBs
Position
16:complement(5946408..5948573)
Genome browser
AA seq
547 aa
AA seq
DB search
MAQRGIQMDQEKLCCSICLDLLKDPVTIPCGHNYCMSCIKSHWDEEEQKEIHSCPQCRQT
FGSRPALGRNTMLADLVEELKRTGLQTAPADHCYAGPEDVACDFCTGGKVKALKSCLQCL
VSYCEQHLQPHYEVVPLKKHKLVDPSQKLQENVCTRHNEVMKIFCRTDQKCICYLCSMDD
HKGHDTVSAAAEMTERQKELGLCLQKIQQRIQNREKHVKVLQQEAEAINHSADKAVEDSE
KIFRDAKQQIRSRQKTEVAHVNELEERLKQEITELNRKLAELEQLLDTDHHIQFLRNFIL
LSRLSEATDSPGIDSRPLRYTEDVTAAVSEARDKLQDILSEEWTNMSLTGTEDVLLPQAE
PKTRAEFVQYSCQITLDENTFYGKFMYLDYLRATHRYDFKYDHYGHPDSFTDWAQVLCRE
SLTGRCYWEVDFGGNGIFIAVAYKSISRKGRESAFGHNDKSWALQCFHNGYEFRHNNIRT
PVTGPWSSRVGVYLDHSAGVLCFYSVSETMTLLHRVQTTFTQPLCPGLGVHHNGNYAKIC
TGSNIED
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcgaggaattcagatggaccaggaaaaactctgctgttcgatctgtctggat
ctactgaaggatccagtgactattccctgtgggcacaactactgtatgagctgtattaaa
agccactgggatgaagaggaacagaaggaaatccacagctgtcctcagtgtagacagacc
tttggatcgaggcctgccctggggagaaacaccatgttggcagatttagtggaggaactg
aagaggacaggactccaaactgctccggctgatcactgctatgccggacctgaagatgtg
gcctgtgatttctgcactggtgggaaagtgaaagctctcaagtcctgtctgcagtgtctg
gtctcttactgtgagcagcacctccagcctcactatgaagttgttccattaaagaaacac
aagctggtcgacccctcccagaagctccaggagaacgtctgcactcgtcacaacgaggtg
atgaagattttctgccgcactgatcagaaatgtatctgctatctgtgctccatggatgac
cataaaggccacgacacagtttcagctgcagcagaaatgactgagaggcagaaagagctc
ggcttatgtctgcaaaagatccagcagagaatccaaaacagggagaaacatgtgaaggtg
cttcaacaggaagcggaagctatcaatcactctgccgataaagctgtggaggacagcgag
aagatcttcagagacgccaagcagcagatcagatctcgtcagaaaacggaagtagctcac
gtcaacgagcttgaggagaggctgaagcaggagatcactgagctgaaccggaagctcgct
gagctggagcaactgttagacacagaccatcacatccagttcctgcgcaatttcatcttg
ctgtcgcgtcttagtgaagctacagactcacccggcatcgatagccgtcctctgaggtac
actgaggatgtgactgcggctgtgtcagaggccagagataaactacaggacattctgagt
gaggaatggaccaacatgtcgctgacagggactgaagatgttttactgccacaggcagaa
cccaagaccagagctgaattcgtacaatattcatgtcaaatcacactggatgagaacaca
ttctatgggaaatttatgtatttggattacctaagagcaacacacagatatgattttaaa
tatgaccattatggtcacccagacagttttactgactgggctcaggttttgtgtagagaa
agtctgactggacgttgttactgggaggtggactttggagggaacggcatttttatagca
gttgcatataagagtattagcagaaaaggaagagaaagtgcatttgggcacaatgacaag
tcttgggcattacagtgtttccataatggttatgaattcagacataacaacatcagaact
cccgtcactggtccttggtcctcccgagtgggggtgtacctggatcacagtgcaggggtt
ctgtgtttctacagcgtctctgaaaccatgaccctcctccacagagtccagaccacattc
actcagccactctgtcctggacttggtgtacatcataatggtaattatgctaaaatctgc
acaggttcaaacatagaggactga
DBGET
integrated database retrieval system
