Perca flavescens (yellow perch): 114571254
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Entry
114571254 CDS
T07494
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114571254
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114571254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
U-box
zf-RING_10
DUF445
Prok-RING_4
zf-RING_6
Gp58
Motif
Other DBs
NCBI-GeneID:
114571254
NCBI-ProteinID:
XP_028457924
LinkDB
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Position
16:complement(30930933..30935022)
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AA seq
510 aa
AA seq
DB search
MAQKGVQLDLETFSCSICLDLLKDPVTTSCGHSYCMDCIKSHWDEEDRNYSYSCPQCRKM
FTPRPVLLKNSMLADLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAHKSCLICL
VSFCEKHLQPHYDVAQFKKHKLVEPSKKLQENVCSRHDEVMKMFCRTDQQLICYLCSVEE
HKGHDTVSAAAERTERQRELEGSRQNIQQSIQYREEEVEVLQQDAEYSKKIFTEMIRLLE
KRSSDVKQQVRSQQKSEESRVRELQEKLEQEITELKRKDAELKKLSHTEDHTQFLHNYPS
LSPLIQSEAKRTYTQPEPKTRAEFLKYSREITLDPNTANKNVLLSKGNRKATYIGQPQSY
SSHPDRFTNTSQVLSRESLTGRCYWEVERRGRGRVYIAVAYKTMRRARVQGWDLYDSGFG
FNDKSWALDCIDSSSVFFSDRVHAPVSGPVSSRVGVYLDHSAGILSFYSVCETMTLLHRV
QTTFTRPLYAGLRVWYCEKESGVSAELCLN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggacctggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactacttcctgtggacacagctactgcatggactgtattaaa
agccactgggatgaagaggatcgtaactacagctacagctgtcctcagtgcaggaagatg
ttcacaccgaggcctgtcctgctgaaaaactccatgttagcagatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactcaaagcacacaagtcctgtctgatctgtctg
gtctctttctgtgagaaacaccttcagcctcattatgatgtagctcagtttaagaaacac
aagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcagcagcttatctgttatctctgctctgtggaggaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggggagtcgacaaaacatccagcagagcatccagtacagagaggaagaagtggaagtg
cttcaacaggatgcagagtacagcaagaagatcttcactgagatgatccgtctcctggag
aaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagagagtcga
gtcagagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgct
gagctgaagaagctctcacacacagaagatcacacccagtttctacacaactacccctca
ctgtctccactcatccaatcagaagcgaagaggacatatacacaaccagagcccaagacc
agagctgaattcttaaaatattcacgtgaaatcacactggatccaaacacggcaaataaa
aatgtgttattatctaaagggaacaggaaagcaacatacataggacaacctcagtcttat
tctagtcacccagacagattcactaacacgtctcaggtcctgagtagagagagtctgact
ggacgttgttactgggaggtggagaggagagggagaggaagagtttatatagcagttgca
tacaagactatgagaagagcacgggtgcaagggtgggacttgtatgactctggatttgga
ttcaatgacaaatcttgggcgttagattgtatcgacagcagttctgtatttttttccgac
agagtccatgctcccgtctcaggtcccgtgtcctccagagtaggagtgtacctggatcac
agtgcaggtattctgtccttctacagcgtctgtgaaaccatgactctcctccacagagtc
cagaccacattcactcggcccctctatgctggactaagggtttggtattgtgaaaaggag
tctggagtctctgctgagttgtgtctaaactga
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