Pseudomonas fluorescens UK4: HZ99_18485
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Entry
HZ99_18485 CDS
T03319
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HZ99_18485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfn02000
]
HZ99_18485
02044 Secretion system [BR:
pfn02044
]
HZ99_18485
Transporters [BR:
pfn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HZ99_18485
Secretion system [BR:
pfn02044
]
Type I secretion system
Adhesin protein transporter
HZ99_18485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
DUF87
AAA
RsgA_GTPase
AAA_29
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AIG04070
UniProt:
A0A379I599
LinkDB
All DBs
Position
4030112..4032268
Genome browser
AA seq
718 aa
AA seq
DB search
MESEVSRVNLSHDPRTLHDDPLLDGLLALCALHQKPASAAMLTTGLPLPSQQLTADLLAR
AAARAGLQGRLLQRKLDSIPAIAMPALLLLKDGRSAVLLGWQGEDEAQVLLSESDGGETI
VKRQALADDYIGKVFFAQPQHKFDVSHGTLIPRARSWFRDTLKRSRWLYADAIAASFLIN
LIALAAPLFVMNVYDRVVPNQAIATLWVLATGIFIAYVFDLILKSLRSLCLDLAGKKTDL
IISATLFERIVGMSMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFLVI
AILGGHLVWIPMLAFPIALGIGYLLQKPLVATMERTMALASERQSSLIETLAGLDAVKVN
NAESERQYQWEQTIGTLSRLELRVKMLSGLSMNITLLIQQLAGVIMIVFGVYQIIAGNLS
MGGLIACYMLSGRALSPLASLSGLMTRYQQAKVTMVSTDQMMELPQERNFEERPLSRRTL
QGAIECRGLNFTYPNQQNMALKNINLVIKPGEKIGIIGRSGSGKSSLAKLIVGLYQPDSG
ALLVDGVDIRQIDVSELRHNVGYVPQDIQLLAGTLRDNLVSGARYVEDEVVLQAAELAGV
HEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERL
KQRLQAVVANKTVVLVTHRASLLSLVDRLLVIDRGQILADGPKAVVMEALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcagaagttagtcgagttaatctcagccatgatccacgcacactgcacgacgac
ccgttactcgacgggttgttggcgctctgtgcactgcaccagaagcctgccagtgcggcg
atgctgaccaccggtctgccattgccgtcacagcaactgacggctgatctgcttgcccgc
gctgcggcccgggccggtttgcaggggcggctgctgcagcgcaagctcgattcgatcccc
gcgattgccatgccggcgctgctgttgctcaaggacggccgcagtgccgtgctgctcggc
tggcagggtgaagacgaggcccaggtactgctcagcgaaagcgacggtggtgaaaccatc
gtcaagcgccaggcgttggcggatgactacatcggcaaagtgttctttgcccaaccccag
cacaagttcgatgtcagccacggcaccctgatcccccgggcccgctcctggttccgcgac
accctcaagcgttcgcgctggctctacgccgatgccatcgccgccagcttcctgatcaac
ctgattgccctggccgcgccgctgttcgtgatgaacgtctacgaccgcgtggtgccgaac
caggccatcgccaccttgtgggtgctggccaccggtattttcatcgcctacgtcttcgac
ctgatcctcaagagcctgcgcagcctgtgcctggacctggccggcaagaaaaccgacctg
atcatctcggccacgctgttcgagcggattgtcggcatgtcgatgaagtaccgcccggcg
cgggtcggcagcttcgcccagaacatccacgagtttcagagcctgcgtgacttcctcgcc
tccctgaccctcaccagcctgatcgacttgccgttcaccctgctgatattcctggtgatc
gccatcctcggcgggcatctggtgtggattcccatgctggccttcccgattgccctgggc
atcggctacctgctgcaaaagccgctggtcgccaccatggagcgcaccatggccctggcc
tccgagcgccagtcgagcctgatcgaaaccctggccgggctggatgcggtcaaggtcaac
aacgctgaaagcgagcgccagtaccagtgggaacagaccattggcaccctcagccgcctt
gagttgcgggtgaaaatgctctccgggctgtcgatgaacatcaccctgctgatccagcaa
ctggcgggtgtgatcatgattgtcttcggcgtctaccagatcatcgccggcaacctcagc
atgggcggcctgattgcctgctacatgctcagtggccgcgccctcagccccctggcatcg
ctgtcgggcctgatgacccgctaccagcaagccaaggtcaccatggtctccaccgaccag
atgatggagctgccccaggagcgcaacttcgaggagcgccccttgagccgccgcaccctg
caaggcgccatcgaatgccggggcctgaacttcacgtaccccaaccagcagaacatggcg
ctcaagaacatcaacctggtgatcaagcccggcgagaagatcggcatcatcgggcgcagc
ggctcaggcaaaagctccctggccaaactgatcgtgggcctctaccagcccgactccggc
gccttgctggtggacggcgtggacattcgccagatcgacgtcagcgagctgcgccacaac
gtcggctacgtgccccaggatatccagctgctagccggcaccctgcgcgacaacctggtc
tccggcgcccgctacgttgaagacgaagtggtactgcaagccgcagaactggcgggcgtc
cacgaatttgcccgcctgcatccacaaggctacgagctgcaagtaggggagcggggccag
aacctttctggcggccagcgacaaaacgtcgctctggcgcgtgccctgttgctcaacccg
cccatcctgctgctggacgaaccgaccagcgccatggacaacaccggtgaggaacgcctc
aagcagcgtctgcaagccgttgtggcaaacaagaccgtggtgctggtgacgcaccgtgcg
tccttgctgtctttggtggaccgcttgttggttatcgaccgtgggcaaatcctcgcggat
ggcccgaaagccgtagtgatggaagcgttgaagaaggggcagatcagtgttgcgtaa
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