KEGG   Pseudomonas fluorescens UK4: HZ99_18535
Entry
HZ99_18535        CDS       T03319                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfn  Pseudomonas fluorescens UK4
Pathway
pfn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pfn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HZ99_18535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfn03021]
    HZ99_18535
Transcription machinery [BR:pfn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HZ99_18535
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 HTH_31 HTH_24 Sigma70_ECF HTH_40 HTH_3 HTH_17 HTH_11 MarR_2 HTH_IclR HTH_Tnp_4 GerE MarR TnsD Rv2175c_wHTH
Other DBs
NCBI-ProteinID: AIG04080
UniProt: A0A379I5A1
LinkDB
Position
4042815..4043324
AA seq 169 aa
MDTATDSQQQLHLLYRDHHGWLQGWLRKRLGDREHAADVAQDTFLRLLVSGRFPGARESR
SYLTQIARNLVIDQWRRLRIERAYLQSIAHLPEPESPSLETRALILETLMQIDAMLDRMP
ENVRRAFLLSQFEGLTYAQIAERLGVTISSVQKYMTRAIIACYQVAYEA
NT seq 510 nt   +upstreamnt  +downstreamnt
atggacaccgcgactgacagccagcaacagcttcatctcctgtaccgcgaccatcatggc
tggctgcaaggctggctgcgcaagcgtctgggcgaccgcgagcacgccgccgacgtggcg
caggacacgttcctgcgcctgctggtgtcggggcgttttcccggtgccagggaaagccgc
agctacctgacacagatcgcccgcaacctggtgatcgaccagtggcgccgcctgcgcatc
gagcgcgcctacctgcaaagcattgcccatttgccggagcccgagtcgccgtccctggaa
acccgtgcgctgattctcgaaaccctgatgcagatcgacgccatgctcgaccgcatgccc
gagaacgtgcgccgggcgttcctgttgtcgcagttcgagggcctgacctacgcgcagatc
gccgaacgcctgggggtgacgatcagctcggtgcagaagtacatgacccgcgcgatcatc
gcctgctaccaagtggcctacgaagcatga

DBGET integrated database retrieval system