Pseudomonas fluorescens Pf0-1: Pfl01_3126
Help
Entry
Pfl01_3126 CDS
T00283
Name
(GenBank) putative Sigma-24 (FecI) factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pfl01_3126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfo03021
]
Pfl01_3126
Transcription machinery [BR:
pfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pfl01_3126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
HTH_24
HTH_AsnC-type
MarR_2
HTH_31
HTH_11
HTH_3
DUF4274
Motif
Other DBs
NCBI-ProteinID:
ABA74864
UniProt:
Q3KBJ0
LinkDB
All DBs
Position
complement(3588919..3589425)
Genome browser
AA seq
168 aa
AA seq
DB search
MGSHNPHYQVIGQMFQKDYRWLCAAVSRTLGCPHSAQDIASETFLRVLALPDPLAIREPR
ALLTTIARRLVYEGWRRQDLERAYLQSLALAPEPVHPSPEERELVIETLLAVDRLLNGLS
AKAKAAFLYHQLDGLTYSEIGERLGVSTSRVQQYMVEAFKRCYQAMQA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcacaacccgcattaccaggtcatcgggcagatgttccaaaaggactaccga
tggctgtgcgcggcggtcagccgtacgctcggttgcccgcacagcgcacaggacattgct
tcggaaacctttcttcgggtattggcgctgcccgatccgctggcaatccgcgaaccccgc
gcgctgttgaccacgattgcccggcggctggtctatgaaggctggcgccggcaggatctg
gagcgcgcttatctgcaaagcctggcgctggcgccggaaccggtgcatccgtcgcccgag
gaacgggaattggtgatcgaaacgctgctggcggtggatcgcttgctcaacggcctgtcg
gccaaggccaaggcggcgtttctctaccaccaactcgacggcctgacctacagcgaaatc
ggcgaacgcctcggcgtgtccaccagccgcgtgcagcaatacatggtcgaggcgttcaag
cgttgctatcaggcgatgcaggcatga
DBGET
integrated database retrieval system
