Pseudomonas fluorescens Pf0-1: Pfl01_4671
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Entry
Pfl01_4671 CDS
T00283
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo00470
D-Amino acid metabolism
pfo00550
Peptidoglycan biosynthesis
pfo01100
Metabolic pathways
pfo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pfl01_4671 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pfl01_4671 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pfl01_4671 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Pfl01_4671 (ddlB)
Enzymes [BR:
pfo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pfl01_4671 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Precursor biosynthesis
Amino acid ligase
Pfl01_4671 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
ATP-grasp_3
RimK
ATP-grasp_5
GARS_A
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
ABA76408
UniProt:
Q3K746
LinkDB
All DBs
Position
complement(5272734..5273708)
Genome browser
AA seq
324 aa
AA seq
DB search
MTAAYANLFSTIAPKDFGRVAVLFGGLSAEREVSLKSGNAVLTALQSAGVDAFGIDVGAD
ILQRLLSEKIDRAFIILHGRGGEDGSMQGLLEVAGIPYTGSGILASALAMDKLRTKQVWH
TLGIPTPRHAVLRSEADCISAATELGFPLIVKPAHEGSSIGMAKVSSASELIDAWKAAST
YDSQVLVEQWIHGPEFTIATLRDQVLPPIALGTPHTFYDYDAKYIANDTQYRIPCGLDAA
KEKELMDLTAQACEALGIAGWGRADVMQDADGKFWFLEVNTAPGMTDHSLVPMAAKAAGL
DFQQLVLAILAASVDADGKKEARG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcctacgccaatctgttctccaccatcgccccgaaggatttcggccgtgtg
gccgtgttgttcggtggcctgagtgccgagcgtgaagtctcgctgaagtccggcaatgcc
gtgctcactgcgctgcaaagcgcaggtgtggacgcgttcggcatcgacgtcggcgccgac
attctgcagcgcctgctgagcgagaagatcgaccgcgcgttcatcatcctccacggtcgt
ggcggtgaagacggcagcatgcagggcctgctcgaagtggccggcattccgtacaccggc
agtggcatcctggcttcggcactggcgatggacaagttgcgcaccaagcaggtctggcac
acgctcgggattccgacgccgcgtcacgccgtgctgcgcagcgaggccgattgtatttcg
gcggcgacggaactgggcttccctttgatcgtcaaaccggcgcatgaaggttcaagtatc
gggatggccaaagtgagttctgcgtccgagttgatcgacgcatggaaagcggccagtacc
tacgattcgcaagtgttggtcgagcaatggatccacggtccggagttcaccatcgccacc
ctgcgtgaccaggtgttgcctcctatcgccctgggtacgccgcacacgttctacgactac
gacgccaagtacatcgccaacgatacccagtatcggattccgtgcgggctcgatgccgcc
aaggaaaaagaactcatggacctcacggcgcaagcctgcgaggcgctgggtattgccggt
tggggccgggcggacgtgatgcaggacgccgacggcaaattctggttcctggaagtcaac
accgctcccggcatgaccgatcacagcctggtaccgatggcggcgaaagcggccggtctg
gatttccagcagctggtcctggccattctggccgccagtgtcgatgccgacggcaagaaa
gaggcgcgaggttaa
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