Poecilia formosa (Amazon molly): 103130043
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Entry
103130043 CDS
T07984
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfor04121
]
103130043
Ubiquitin system [BR:
pfor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103130043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
Gp58
SseC
Motif
Other DBs
NCBI-GeneID:
103130043
NCBI-ProteinID:
XP_007541383
Ensembl:
ENSPFOG00000008689
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MEQNQLDQETFSCPICLDLLKDPVTIPCGHSYCMSCIEIHWDEEDQRRIHSCPQCRETFI
PRPAVKKNTMFAALVEQMRKTGLQAAPADHCYAGPEDVACDSCTGRKLKARKSCLICLAS
FCEKHLQPHYDSAAFQKHKLVEPSNNLQENFCSKHDKLLEIFCRTDQKCICYLCTMDEHR
GHETVSAAAERTERQRELEERRGNIQQRIQDREKDVKLLQQEVEAINHSADKTVEDSEEI
FTDMIRLLQKRSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDH
SQFLLNYPSLPALRESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLMVG
EVDVLLSEPEPKSRAGFLKYSCEITLDPNSAHTQLGLSEGNRKVTRMNQHQLYSSHPDRF
TNYSQVLSRESLTGRCYWEVKWTGSVCVAVAYKNISRAGGELECRFGRNDKSWALDCQQK
GFKFVHKSIWTSISGPVSSRLGVYLDLRAGLLSFYCVSETMTLIHRVQTTFSQPLHAGVG
VGLGSSAEFSKPN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctggaccaagaaactttctcctgcccgatctgtctggatctactg
aaggatccggtgaccattccctgtggacacagctactgcatgagctgtatcgaaatccac
tgggatgaagaggatcagaggaggatccacagctgccctcagtgcagggagacgttcata
ccgaggcctgctgtgaagaaaaacaccatgtttgcagctttagtggagcaaatgaggaag
actggactccaagctgctcctgctgaccactgctatgctggacctgaagatgtggcctgt
gattcctgtactggaagaaaactgaaagccaggaagtcctgtttaatctgtttggcctct
ttctgtgagaaacaccttcagcctcattatgattcagctgcatttcagaaacacaagctg
gtggagccgtccaacaacctccaggaaaacttctgctctaagcatgataagttgctggag
atcttctgccgcactgatcagaagtgtatctgttatctctgcaccatggatgaacataga
ggccatgagacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggag
agacgaggaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcag
caggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgaggagatc
ttcactgacatgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggag
atcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcac
agccagtttctcctcaactacccctcactgccagcactcagggagtcgacacactcatcc
agcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctc
agagagaaactacaggacgtcctgagagactcgtggacaaacatctcactgatggtcggt
gaggtggatgttctactgtcagaaccagaaccaaagagcagagctgggttcttaaagtat
tcatgtgaaatcactctggatccaaactcagcacacacacagctgggcctgtcagagggg
aacaggaaggtgacgaggatgaatcaacatcagctttattctagtcacccagacagattc
actaattattctcaggttctgagcagagagagtctgactggacgttgttactgggaggtg
aagtggaccgggtcggtttgtgttgctgtcgcctacaagaacatcagcagagcaggaggt
gagcttgaatgtagatttggacgcaatgacaaatcttgggctttagattgtcaacaaaaa
ggttttaaatttgttcacaaaagcatctggacctccatctcaggtccagtttcctccaga
ctgggggtgtatctggacctcagagcaggtcttctgtccttctactgcgtctcagaaacc
atgactctgatccacagagtccagaccacattcagtcagccgcttcacgctggggttggg
gttggtttaggaagctctgcagagttcagtaaacccaactag
DBGET
integrated database retrieval system
