Poecilia formosa (Amazon molly): 103134185
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Entry
103134185 CDS
T07984
Symbol
col19a1
Name
(RefSeq) collagen alpha-1(XIX) chain isoform X3
KO
K24340
collagen type XIX alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103134185 (col19a1)
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103134185 (col19a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103134185
NCBI-ProteinID:
XP_007546391
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MNCYLIRWVAFVWIVNSVPCAFGMVVSEQTGGVCPSLSVEDYRFSDVLDRPLQITGFDLT
EKFLLRKGTVTEDLPSFRLGSSPLIKPTKSIFPDGLSNEYSLVTIFRVRRTTKKDRWYLW
QIFDQSGSSQVSVVVDGDKKAVEFSSQGLLKNSFRYTFKSRDLHALFDRQWHKLGISVHS
DTVSIYVDCTLAEKKMTDERDSIDLNGRTLISTRVEDGRPVDIELRQILIYCDPYMAEME
NCCELLEPKCGVNRTFIGTSPPLVTAQSPLMPSQPTSQSIDTCHCPGEKEDAGVPGVLGL
FKQNREKGDKGELGSEGQKAIDGERGDEGLAENPGLPGPRGDKGEKGSAGVPGQPGKEGK
RGRRGKPGEPGPRGPPGPSGTIEGASAKREKGECGVPGEKGERGDPGQPGAEGTGGAKGQ
KGDVGPPGPPGSVMTAHGLRQLSGTDERVQKGEKGDEGEKGAQGLPGLKGSMGPPGLKGD
QGLEGKQGLPGSAGLPGLPGDSGLPGEPGVPGRDGLKGEKGDSGAVIGPQGPPGPKGEPG
EPGSAYMSDGLSLSRGSRGPKGERGVPGVPGDHGEKGEPGESIVGPAGPPGKPGAEGLRG
PPGFSGPPGAPGREGSRGRPGPPGPAGPPGEPTALPLVGDMGALLKNACSLCQTRVPGLP
GQKGEKGSPGVQGVEGLVGEKGDPGVRGPMGNPGKEGPKGVKGERGFPGPSGDKGDEGPP
GAPGLPGVTGRTGAPGLVGRPGSMGPQGSKGEKGNDGAPGRQGLPGPPGAPYVEGNGMSS
LYKLQSGGAILGPPGAPGAPGPKGDEGPVGEPGPMGLPGLEGLPGAKGDIGLPGPPGTSG
PPGKPGTRGEPGIPGEPGERGPIGETGFPGPEGPQGVPGRPGKDGTPGYKGSTGTPGDRG
SKGERGDPGIPGERGIQGERGRMGDPGMVGAMGPQGVKGDPGPPGQLGSVKLLDDPSFTE
ELKIFIQSEVMRIFEEKVSGAATQQKTPAGILASPFQGPPGPPGKDGSSGPPGEPGPPGP
QDPYINAD
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaattgctacttgataagatgggttgctttcgtttggattgtgaactctgttccctgt
gcttttggaatggtcgtgagcgaacaaacaggtggtgtgtgtccctctttgagtgttgag
gattacagattttctgatgttttggaccgtcctttacagattacaggatttgacctcaca
gaaaaatttcttctccgaaagggaacagttacagaagacctgccatcatttcgactggga
agcagccctcttataaaaccaacaaaatcgatatttccagacggactttcaaatgagtat
tccctggtcaccatcttccgtgtgagacgaactacaaaaaaagaccgctggtacctttgg
caaatatttgaccaatcaggaagcagtcaggtgtcagtggtggttgatggtgataagaaa
gcagtggagttttcttcccagggtctgctgaaaaactctttccgctacacgtttaagagt
cgtgacctgcatgccctctttgatcgccaatggcacaagcttggcatttctgttcacagt
gacacagtttccatttatgtcgattgcacgctggctgaaaagaaaatgactgatgagagg
gacagcatcgatctcaacgggcgcacactcatcagtacacgagtggaagatggaaggcct
gtggatattgagttgagacaaattctgatctactgtgacccttacatggctgaaatggaa
aactgctgtgagctgcttgagccaaagtgtggagtcaacaggacatttattgggacctcc
cctcctctggttacagcccagagtcccctgatgccgtctcagccgacctcacaatcaatt
gacacatgtcactgtccaggagagaaggaagatgctggtgttccaggtgtgcttgggctg
tttaaacaaaacagggaaaaaggagacaagggggaacttggatcagaaggtcaaaaggca
atcgatggagagaggggggacgaaggcctggctgaaaacccagggctgcctggccctcga
ggagataaaggagaaaagggatcagccggagtgccgggtcagccaggcaaagagggcaag
aggggacggagaggaaagccgggggagcctggaccaagaggcccacctggtccttcagga
accatagagggagcaagtgcaaagagggagaagggggagtgtggcgtccctggggaaaag
ggagagagaggagatcccggtcagccaggtgccgaggggactggtggcgcgaaaggacaa
aaaggtgatgttggtcctcctggtcctcctggttctgtgatgacagctcatgggttaaga
cagctctctggaactgatgaaagagtccagaagggtgagaagggagatgagggcgagaaa
ggagctcaaggactgccgggcctaaagggaagcatgggacctccgggactgaagggagat
caaggattggagggaaaacaaggtctacctggatccgctgggctccctggactcccaggc
gattctggcttaccaggggagccgggggtgcctgggagagatggcctgaaaggagaaaag
ggagactctggggcagtgattggtccacaggggcctcctggtcctaagggggagcctgga
gaacctggcagtgcatatatgagtgatgggctgtctctgagtagagggtctcgtgggccg
aagggtgaacgaggtgtgcctggagtgcctggagaccacggcgaaaagggagaacctgga
gagagtatcgttggccccgcgggacccccagggaagccaggagctgagggtctccgtgga
ccaccgggtttttccggccctcctggagctccaggaagagagggctcccgtggtagaccg
ggtccaccgggccctgctggacctccaggtgaaccaactgccctgcctctcgttggagac
atgggtgcattacttaagaacgcctgcagtctttgccagacaagagttcctggtctgcct
gggcagaagggagagaagggttcccctggagtgcaaggagtggaaggcttggtgggagaa
aagggggatccaggtgtaagaggtccgatgggtaatccaggaaaagaaggcccaaagggc
gtaaagggagagagaggcttcccaggcccctccggagacaagggtgatgagggccctcca
ggagctccaggacttccaggcgtaacaggtcgaacaggagccccgggacttgtaggtaga
cctggttctatgggcccacaaggatcaaagggagaaaagggaaacgatggagctccaggc
agacaaggacttccaggacctccaggtgcgccgtatgtggagggaaacgggatgagcagt
ctgtacaagctgcagagtggtggagctattttaggacctcctggagcgcccggtgctccg
ggcccaaaaggagatgaaggacctgtcggggaaccaggacccatgggcttacccgggctc
gaagggcttcccggtgccaagggagatatcggcctgcctggccctcctgggacatcaggt
cctccagggaaacccggaacacgcggagagccagggatcccaggagagccgggcgagagg
gggcccatcggagagaccggattccctggacccgaggggcctcaaggtgttcctgggagg
cctggaaaagatggaactcctggatacaagggctccacgggtacaccaggcgacagagga
tccaaaggtgaacgtggtgatccaggcattccgggagaaagaggcattcaaggtgaaagg
ggccgcatgggcgaccctggcatggttggagcgatggggccgcaaggtgtaaaaggagat
cctggcccccctgggcagctggggagcgtaaagctcctggatgatcccagctttacagaa
gaactcaaaatctttatccaaagtgaagtaatgaggatttttgaagagaaagtgtctggc
gccgccacgcaacagaagacacctgccggcatcttagcttcacctttccaaggtcctcca
ggacccccgggcaaggatgggtcctcaggtccaccaggagagcctgggccacctggacct
caagacccatatatcaatgcagactga
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