Poecilia formosa (Amazon molly): 103135737
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Entry
103135737 CDS
T07984
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03013
Nucleocytoplasmic transport
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103135737 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
103135737 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103135737 (thoc1)
03041 Spliceosome [BR:
pfor03041
]
103135737 (thoc1)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103135737 (thoc1)
Spliceosome [BR:
pfor03041
]
Complex C
Other components
EJC/TREX
103135737 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103135737 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
103135737
NCBI-ProteinID:
XP_007548682
Ensembl:
ENSPFOG00000011673
UniProt:
A0A096MB22
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MSPPVFNFVDVKEKFTAAARQALSGKTCKHLITVFSQISGNETEKKTTLDQALRGVLGDQ
IIEQKTSCDDYLSLIYLSIDAVTEGICSATIPFVLLGDVLDCLPLDLCDKIFSFVEKNVS
TWKSSSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKQTDEKEDTMEVEEGEMGEDDAPAPCSIPIDYNLYRKFWTL
QDYFRNPVQCYDKFSWMTFLKFSDETLAVFKSFKLDDMQASKRKMEDLRASDGGHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQSAWIEETTKLV
YQLLRETPPEGEQFATMVEHILNTEENWNSWKNEGCPSFVKERTSDDKPKRPTRKRQAPE
DFLGKGPEPKIFMGNDELTRLWNLNQDNMEACKSESREFMPSLDEFFAEAIEQADPVNMV
EEEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDTMVCKLAKELPKDIPSE
EIKTGEEDDDDNGDNLLKDSNDSPSIQSKTVTNHQMDDIAAKLGSQWKTLASHLEMKAAE
MREIETDSEDVDVQAKLLLVAWQEREGSQATVENLATALSAAGFSQLAERLGEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccccgtattcaattttgtcgatgtcaaggagaaatttacggctgctgccaga
caggctctctcgggtaaaacctgcaaacatctaatcactgtgtttagccagatctccgga
aatgagacagaaaagaagaccacactcgaccaggccctgcggggtgttctcggtgatcaa
attattgagcagaagacgagctgtgacgactatctgtctctcatctacctgagtatcgat
gctgttactgagggaatctgctctgccacaatcccattcgtcctgctgggagatgtactg
gactgccttccccttgacctgtgtgacaaaatattctcctttgttgagaaaaatgtctcc
acctggaaatcgagctcattctacacggcaggaaagaactatctgctgagaatgtgcaac
gatcttctgaggaggctgtccaaatcccagaatactgtattctgtgggcgaatccagctt
ttcctggcacgactcttccctctatctgagaaatctggtctgaatctgcagagtcagttt
aatctggacaacataacagtgttcaacaagaatgagcaggagagcactcttggccagaag
cagacggatgaaaaggaagacacaatggaggtggaggaaggtgaaatgggggaggatgat
gcacctgcgccctgttctatcccaattgattacaacctatacagaaagttctggacgttg
caggactacttcagaaatccggtgcagtgctacgacaaattctcatggatgacgttcctt
aagttttcagacgagaccctcgccgtattcaagagcttcaagctggatgacatgcaggcc
tctaaaaggaagatggaggacctcagagcctctgacggcggacacgtttattttgccaaa
ttcctcacaagtgagaagctgatggacttgcagctcagcgacagcaacttcagacggcat
atactgctgcagtacctgatcctcttccagtaccttaagggacaggttaaattcaaaagc
tccagctgcgttctgaacgacgaccagagtgcatggattgaggagacgacgaagctagtt
tatcagctgctgagagaaacgcctcctgaaggagaacaattcgccaccatggtggagcac
attctcaacacggaggaaaactggaactcctggaagaacgagggctgtccgagcttcgtg
aaagaaagaacatctgacgacaaacctaaaaggcccaccaggaaaagacaagctccagag
gacttccttggaaaagggccagagcccaagattttcatgggaaatgatgagttgactcga
ctgtggaacttgaaccaggacaacatggaggcctgcaagtctgaaagcagagagtttatg
ccgtcactagacgagttctttgcagaagccattgagcaggccgatccagtcaacatggtg
gaggaggaatataaggttgtgcgtaacccaaactacgggtggcgggctttgaggctcctg
tccaggaggagtccacacttctttcagccaacgaaccagaagttcaaaagcctggcagac
tacctagacaccatggtctgcaaactggccaaagagctgccgaaggatatcccttcagaa
gaaatcaagacaggagaggaggatgatgacgataatggagacaatcttcttaaagacagc
aatgacagtccgagcatccagagtaaaactgtaacaaaccatcagatggacgacattgca
gccaaactggggtcccagtggaagacgctggcgtctcatctggagatgaaggcagcagag
atgcgggaaatcgagacggacagtgaagatgtggacgttcaggccaagcttctgctggtg
gcctggcaggagcgagagggatcccaagcaacagtggagaacctggcaacggctctcagc
gcagcagggttctcccagcttgcagaacgcctcggtgaggcttga
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