Poecilia formosa (Amazon molly): 103142692
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Entry
103142692 CDS
T07984
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfor04121
]
103142692
Ubiquitin system [BR:
pfor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103142692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-RING_5
zf-RING_10
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
Motif
Other DBs
NCBI-GeneID:
103142692
NCBI-ProteinID:
XP_007558917
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MEQNQLDQETFSCLICLDLLKDPVTTACGHSYCMNCIETHWDGESWIHWDGVNLMRIYSC
PQCRERFIPRPVLKKNTMLAALVEQLKLIWLQAAPGDHCYAGHKDVACDFCTGRKLKAIK
SCLVCLASYCEKHLQPHYDVGPLKKHKLEEPSKNLQENICSKHDEVMIMFCFNNRKYICL
TCFMDEHKGHITVSAATEETDAELEQLSHTEDHSKFLLNYPSLPTLSKSTHSSSIIGRPL
RYFEDARAAVSELTDKLQDVLKDSWTNILHRLNDVDVLLPGPEPKSRAGFLKYSCEITLD
PNTAHTQLLPSEGNRKVTGINLDQSYSSNPDRFTYWCQVLSRESLTGRCYWEVERCGAVD
VAVAYKNISRAGDKNECGFGNNEKSWALECSQNSFHFGHKDIWTPISAPVPSRVGVYLDH
RAGILSFYSVSETMTLLHRVQTRFTEPLLAGVWVGNPGDSVEFCKLR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctggaccaagaaactttctcctgtttgatctgtctggacctactg
aaggatccggtgactactgcctgtggacacagctactgcatgaactgtattgaaacccac
tgggatggagagagttggatccactgggatggagttaatttgatgagaatatacagctgc
cctcagtgcagggagaggttcataccgaggcctgtgctaaagaagaacaccatgctagca
gctttagtggagcagctaaagttgatttggctccaagctgctcctggtgaccactgctat
gctggacataaagatgtggcctgtgatttctgcactggaagaaaactgaaagccatcaag
tcctgtttagtctgtctggcctcttactgtgagaaacaccttcagcctcattatgacgtg
ggtccattaaagaaacacaagctggaggagccgtccaagaacctccaggagaacatctgc
tctaagcatgatgaagtgatgataatgttctgcttcaataatcggaagtatatctgtctc
acctgtttcatggatgaacataaaggccacatcacagtctcagctgcaacagaagagact
gacgctgagctggagcagctctcacacacagaggatcacagcaagtttctcctcaactac
ccctcactgccaacactcagtaagtcgacacactcatccagcatcattggccgtcctctg
agatactttgaggatgcgagagcagctgtgtcagagctcacagataaactacaggacgtc
ctgaaagactcatggacaaacatcttacatagacttaatgatgtggatgttttactgcca
ggaccagaaccaaagagcagagctggattcttaaaatactcatgtgaaatcactctggat
ccaaacacagcacacacacagttgttaccatcagagggtaacaggaaggtgacaggaata
aatctggatcagtcttattctagtaacccagacagattcacttattggtgtcaggttctg
agcagagagagtctgactggacgttgttactgggaggtggagagatgtggggcagttgat
gtagcagtcgcatacaagaatatcagcagagcaggagataagaatgaatgtggatttgga
aataatgaaaagtcttgggctttagagtgttcccaaaacagttttcactttggtcacaag
gacatctggacccccatctcagctccagttccctccagagtcggagtgtacctggaccac
agagcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtc
cagaccagattcactgaaccgctactggctggagtttgggttggtaaccctggagactct
gtggagttctgtaaactcagatag
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