KEGG   Pseudozyma flocculosa: PFL1_00650
Entry
PFL1_00650        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03013  Nucleocytoplasmic transport
pfp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PFL1_00650
   03015 mRNA surveillance pathway
    PFL1_00650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfp03019]
    PFL1_00650
Messenger RNA biogenesis [BR:pfp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     PFL1_00650
   mRNA cycle factors
    P-body specific factors
     PFL1_00650
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 19314780
NCBI-ProteinID: XP_007876334
LinkDB
Position
Unknown
AA seq 665 aa
MSQAAQPAAASDSPANATKSTKSAASPAAASPAPSAASSSRSRSRRAKTDTKAPAKTSAH
SATAPDAASSTSVAATAQNSSTSAAAAATTADPNTLVKPTSTRRSRSKKDKEKSASAKQQ
KTKAKTKVVIRRLPPNVPEHIFWNSVATWVRDAAQAKALSDAARQNHDAASSQPSAAPTV
LEPTVDYKLFIPGKLKADPNKENVCSRAYVRFLDPAMLVEFHRNFDGHIFRDSKGNESIA
VVEFAPYQKTPTERRRKPDARQGTIEADEEYKNFIFSLEAKQAERTENKTDAELMAHLAQ
STEKVKDPSATKKSTPLLDHLRTLKAARAESSALAAAKSYKNPYAYQYPDEKSHPSSSSK
SASSKKSSRSSKAAAGEAGEAPAKRSSKKGEAVKEARTAESASTPASSASAPAAGAGKRA
AKAATSGRAFGAALSGALGSAAPSSARSNKATGGKGKEKAEEGGGVESGKATSAKSAPPT
RANVEPAAETSGKASRATGESTKGQGRNRGRNAAAKADAGEATAESAGSTAPSAPATPTT
APSADKKAASASSSSRRDKKSGWSSGPASGKGEEAAGGGGKMTILKRDAQTASVPTSAAA
TVESSGATGGEAREKDKERKKESSDKDKDKEKGKRRRTRPVSKGGEAAGPEKAATSAQPG
QAIWD
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgtcccaggctgctcagccagcagcagcgtccgacagcccagcaaacgccacaaagtcg
accaagtccgcagcttctcccgccgccgcctctcctgcgccttctgccgcctcctcgtcc
cgctcgcgctcacgcagagccaagaccgacacaaaggcgcccgcgaaaacatctgcacac
tccgctaccgcgccagatgcagcatcgagcacctcagtagcagcgacagcgcagaacagc
tccacctcagcagcggccgccgccaccaccgccgatcccaacaccttggtcaaacccacc
agcactcgccgttcgcgatccaaaaaggacaaggaaaagagcgcatcggccaagcagcaa
aagacaaaggcaaagaccaaggtcgtcatccgccgcctgcctcccaacgtacccgaacac
atcttctggaacagcgtagccacctgggtccgcgacgccgcccaggcaaaggcgctcagc
gatgcagcgcgacagaaccacgatgccgcctccagccagccctcggccgcgccgacggtc
ctcgagcccactgtcgactacaagctcttcatcccgggcaagctgaaagccgatcccaac
aaggagaatgtctgctcgcgagcctatgtccgcttcctagaccctgccatgctggtcgag
ttccacaggaactttgacggacacatcttccgcgacagcaagggcaacgagagcattgcc
gtcgtcgagtttgccccgtaccagaagacgcccaccgaacgacgacggaagccggatgcc
aggcagggcaccatcgaggcggatgaggagtacaaaaattttatcttcagtctcgaggcc
aagcaggccgaacggactgaaaacaagaccgatgccgagctgatggctcacctcgcgcag
agcaccgaaaaagtgaaggacccatcggcgacgaaaaagtcgacgccgctgctggaccat
cttcgcacactcaaggccgcacgcgccgagtcctctgcgctcgccgctgcaaagtcctac
aagaacccgtacgcctaccagtaccccgacgaaaagtcgcatccgtcgtcgtcgtcgaag
agcgcgtcctcgaaaaagtcgagcagatccagcaaggccgcggccggagaggcgggagaa
gctccggcgaagcgatcgtcgaagaagggagaggctgtcaaggaagccaggacggccgag
tcggcttctacgcccgcctcatccgcctctgcgcctgccgccggtgcgggcaagcgcgcg
gccaaggcagcgacgagcgggcgtgcctttggagcggcgctttcgggagcactcggatcg
gccgccccgtcgtcggccagatccaacaaggcgacgggcgggaaaggcaaggaaaaggcg
gaagagggagggggcgtcgaaagcggcaaagcgaccagtgccaagtcggcgcctcctacc
cgagccaacgtcgagcctgcggcagagacaagtgggaaggccagtcgcgccactggtgaa
tcgacaaaggggcagggacgaaaccgcggtcgcaacgcagctgccaaggctgatgcgggc
gaggcgacggcggaaagcgccggcagcaccgctccatcggcgcctgcgacgccaacgacg
gcaccctccgcggacaagaaagctgcatcggcgtcgtcgtcgtcgaggcgcgacaagaaa
tcgggctggtcaagcggtcccgcctcgggcaagggcgaggaggcggcaggaggcggcggc
aagatgacgatcctgaagcgggatgcacagactgcttctgtacccaccagcgcggccgct
acggtcgaatcgtcgggcgcaaccggcggcgaagcgagggaaaaggacaaggagaggaag
aaggagagcagtgacaaggacaaggacaaggaaaaggggaagaggaggaggacgaggccc
gtctcgaaaggcggcgaggctgccggtccggaaaaggcggcgacctcggctcagcccggc
caggccatctgggactga

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