Pseudozyma flocculosa: PFL1_01898
Help
Entry
PFL1_01898 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K26979
E3 ubiquitin-protein ligase RNF10 [EC:
2.3.2.27
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfp04121
]
PFL1_01898
Enzymes [BR:
pfp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PFL1_01898
Ubiquitin system [BR:
pfp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
PFL1_01898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
GEN1_C
zf-RING_5
XPG_N
zf-C3HC4_4
zf-C3HC4_3
zf-Nse
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
19316021
NCBI-ProteinID:
XP_007877601
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MASMPTNGSNKPNPNPARQAQQNQHRAPRNNTNHGDTRATQAATAKRGGAQSMNHLLSFT
LPPRARPPAPVSRRSRRAGAGVPFNKERYINAQYRFLVKPTGDYTAYFADSDIYLHWPDI
LQVLIPTTSALSGASAAALPQQDQPLPGTHEGAACPICLSPPTAPRMTKCGHVFCYPCIL
HYLTLADGNAAGGSTGGNAPSHKWRRCPICWDAVYARDLKAVKWWDPRAVAQQHQAEVHE
EQQRLEALRSSRQPQDSATSGGGAVGDAAVASTSAAAHAATGSRQEVLALRLIERPHLTT
LALPQSSTWPTSNLDHPLIPLHSAPWHFQPDVMGFAKFMLASPDLLIESLTGDLVHLENE
LETLKGFGADEVSLEFVRLAERKVKEQIVKVQTELDTAFVRSTIGQIKNDLKDHEAVESG
RISKLDEQLSRRQRKKLERSHTADDGPSAEAEGAAGAGNAVAVEPAASGSQANTSGSQAN
TSGSQANTDDNDRGDGAPETAEGAEEFLAIRSQAYGGSYQNASPAPAPNAANTAAVSAES
DGQSSTKGDQRTSARPHHHQRKNVNPPAPSSSSYLFFQAASGQNIFLHPLDIKIVLSHFG
SYAALPRDLSVKVQGADEGSMNDELRRRCRYLSHIPMATDVVFVEIDWENMDLVSKATLR
PYEQALRQRRTKRRDKQRREDRAKTKAEEAESGSRFGGGSSSGGAGGASAQRHRIDAAGF
GSEANFPSDGLSRSYGSSSFASGHEDGVSAAGLSTSPHVGTSPSFREAALWGAERDFPIH
PGASQIEDFPDSLGASARPPRSDRSPHSGATAGASAISGGGGGGAKKTVWGTPAARNAFD
RALRGGHDESGLWDDDIEDAWHELEEDFILGSTSSGRRPNGAVKEGRGLNRQAASSKKAS
VAGPGTVSGSSTPRGVWAGGRPGTGNGDAAPSDTASGAQTPASAGGGSSSTSSRKKNNKK
KLVLTSGGGRAYPASMGIPGLWAELEPAAVDVPLPKLAYDALQANRNHLRSLRIGIDASL
WLFHSQQSTGGSNPFLRILFFRLARLLSLPVLPLFVFDGPNRPAWKRGKHVAGRQRAIER
DFITVIHAFGFQHRVAPGEAEAELAWLNEQDLVDAVMTDDVDALVFGAKTVIRNWGKKLS
GTIARAKRAQQLQESTADRSLSSDDGDNPFATAGQPVGSSQAAAVSSDTLKVTGSLKDHV
VTVYKDWDIHNMPELSVSRDGLILVALLAGGDYDGQGLLRCGVKIALALAQAGFGDRLVA
AFRRSYRSLDVSARCERFEAFLAEWCREVRDELRTDSRGFLGRRQPRLAAGLTDFASTET
LRRVLAYYVWPLTTGSTPSRQASSSSSSSSSSSSSSSRPAAVGAGAGPAADGADELPVLR
WQAPNVESLVRCAQRFFEWSPATVLARFRSTIWSGLVFRQLRQEVLERDGDDKHGPWAEL
VESPASKAVRQAVRESGGGGAGSGGKAKTAMATATATATATTAASRVLGPVSPAPKRSKP
LHESPQATRITDFFAKASLSSPSSSGRIARGACSDGPSPPTRLSSRDDSSADAAPPPRQP
GDIDIVSISRRRRNVALGEHVECRALVDVSPMVELAEKWIDESVGRERGAVPASDEQGVE
RGSEAEGDERDHDGETGPTRKPVDPREPLLLWIVESLLERGRSGQAALAEFRRKTAAVER
EKAAKARSKARSKAGADTMAEPGRVSRRGQPPSSQPQVPGQGQGQQRTIREFMKANKGKA
TLQQRRGEDATSSLPSRAIKTTTM
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatgcccaccaatggtagcaacaagccaaacccaaatcccgcacgccaggcc
caacaaaaccagcacagagctccccgcaacaacaccaaccatggcgacacccgcgccacc
caggcagccaccgccaagcgcggcggcgcacagagcatgaaccacctcctctccttcacc
ctgcccccgcgcgctcgccctcccgcccccgtctcgcgccgctcaaggcgcgccggcgca
ggcgtccccttcaacaaggagcgctacatcaacgcccagtaccgcttcctcgtcaagccc
accggcgactacaccgcctactttgccgactcggacatctacctacactggcccgacatc
ctccaggtcctcatccccaccacgtcggccctctcgggcgcgagcgcagccgccctgccc
cagcaagaccagcccttaccgggcacccacgagggcgctgcctgccccatctgcctatcg
cccccgaccgcgccccgcatgacaaagtgcggacacgtcttctgctacccctgcatcctc
cattatctcaccctcgccgacggcaacgccgctggtggttcgacgggcggcaacgctccg
agccacaagtggcgccgctgccccatctgctgggacgccgtctacgcgcgcgacctcaag
gccgtcaagtggtgggatccccgcgcagtggcgcagcagcatcaggcagaggtgcacgag
gagcaacagcggctagaggcgctgcgctcgagtcggcagccgcaggattcggccacgagc
ggcggcggtgccgtcggtgatgctgccgtagcctcgacgtccgctgcagcacacgcggcg
accggttcgcggcaagaggtgctcgccctcaggctcatcgaacggccgcacctaaccaca
ctcgccctgcctcagtcgtcgacctggcccacgtccaacctcgaccacccgctcatcccg
ctccactcggcaccgtggcacttccagccggacgtcatgggctttgccaagtttatgctc
gcctcgcccgacctgctcatcgagtcgctgactggcgacctggtccacctcgaaaacgag
ctcgagacgctcaagggctttggcgccgacgaggtcagcctcgaatttgtccgcctcgca
gagaggaaagtcaaggagcagatcgtcaaggtgcagaccgagctcgacacagcgttcgtc
cgcagcacaattggccagattaaaaacgatctcaaggaccacgaggccgtcgagtcgggc
aggatctcgaagctcgacgaacagctcagccgcaggcagagaaagaagctcgaacgcagc
cacacggccgacgacggcccctccgccgaggctgagggcgctgcgggcgcaggaaacgcc
gtcgccgtcgaaccggccgcgtctggctcccaggccaacacgtctggctcccaggccaac
acgtctggctcccaggccaacaccgacgacaacgatcgcggggacggcgcgcccgagaca
gccgaaggcgccgaggagttcctggcgatcagatcgcaggcgtacggcggcagctaccag
aatgcctctcccgcgcctgcgcccaacgccgccaacacggccgcagtctccgccgagtca
gacggtcagtcgtcgacaaagggcgaccagcgcacctcggcccggccgcaccaccaccag
cgcaagaatgtcaacccgccggcgccgagctcgtcgagctacctcttcttccaggcagca
tctggccaaaacatctttctgcatccgctcgacatcaagattgtgctgtcgcactttggc
tcctacgctgctctgccgcgagacctgtcggtcaaggtgcagggcgccgacgaggggagc
atgaacgacgagctgcggcgccgctgccgctacctgagccacatccccatggcgaccgac
gtcgtttttgtcgagatcgactgggagaacatggacctggtgagcaaggccacgctgcgg
ccgtatgagcaggcgctgcggcagaggaggaccaagcgccgggacaagcagcgccgcgag
gaccgtgccaagaccaaggccgaggaggccgagtccggctcgcggttcggcggcggctcg
tcgagcggcggcgccggcggcgcttcggcccagaggcatcggatcgatgcggccggcttt
ggtagcgaggccaacttcccctcggacggcctgtcgaggagctacggcagcagcagcttt
gcgagcgggcacgaagacggagtcagcgctgccgggctgtcaacgagcccgcacgtgggc
acctcgccatcgttccgcgaggcggctctgtggggcgccgagcgcgactttccgattcac
ccgggagcgtcgcagatcgaggactttccggactcgctgggcgcgagcgcacggccaccg
cggtcggatcgttcgccgcactcgggcgccacggcgggtgccagtgctatcagcggcggc
ggcgggggcggcgccaaaaagacggtgtggggcacgccggcggcgcgcaatgcgtttgac
cgtgcgctgcgcggtggtcacgacgagtcggggctatgggacgacgacatcgaggacgcg
tggcacgagctcgaggaggactttatactgggctcgacgtcgtcggggcggaggcccaac
ggtgcggtcaaggagggtaggggtctgaaccggcaggcggcctcgtcgaagaaggcttcg
gtcgcggggccgggcacggtgagcggcagttcgacgccgaggggcgtgtgggcaggcggt
agaccggggacgggcaacggtgatgcagcgccgagcgatacggcatccggtgcgcagacg
ccggcgagcgcgggtggcgggtcgtcgtcgacgtcgtcgaggaagaagaacaacaagaag
aagctggtgctgacgagcggcggcgggcgggcttaccctgccagcatgggcatcccgggc
ctctgggcagagctcgagcccgccgccgtcgacgtgcccctcccgaagctggcctacgac
gctctccaggccaaccgcaaccacctccgctccctccgcatcggcatcgatgcctccctc
tggctcttccacagccagcagagtaccggcggctccaaccctttcctccgcatcctcttt
ttccgcctcgcacgcctcctctccctccccgtcctgcccctctttgtctttgatggaccc
aaccgacccgcctggaagcgcggcaaacacgtcgcggggcggcagagggccatcgagcgc
gacttcatcaccgtcatccatgcctttggcttccagcaccgcgtcgcccccggcgaggca
gaggccgaactcgcctggctcaacgagcaggacctcgtcgatgccgtcatgaccgacgac
gtagacgccctcgtctttggcgcaaagaccgtgatacgcaactggggaaagaagctgtcc
ggaaccattgccagggccaagcgcgcgcagcagctgcaggagagcaccgcagaccgctct
ttgtcgtcggacgacggagacaacccctttgcgaccgcaggccagccagtcggctcgtcg
caggcagcggcggtcagcagcgacacgctcaaggtcacgggctcgctcaaggaccacgtc
gtgactgtgtacaaggactgggacatccacaacatgcccgagctctccgtcagccgcgac
ggcctcatcctcgtcgcgctgctggcgggcggcgactacgacgggcagggcctgctgcgg
tgcggcgtcaagatcgccctcgccctcgcccaggccggcttcggagaccggctggtcgcc
gcattccggcgcagctaccgctccctcgacgtgtcggcccggtgcgagcgcttcgaggcg
tttctggccgagtggtgccgcgaggtgcgcgacgagctccgcaccgactcgcgcggcttt
ctcggcaggaggcagccccggctcgccgctggcctgaccgatttcgcgagcaccgagacg
ctgcgccgtgtgctggcctactatgtctggccgctcacgactgggtccactccgtctcgc
caagcttcgtcctcgtcgtcgtcgtcgtcgtcctcgtcgtcgtcgtcgtcgagaccggcc
gcagtgggtgcgggtgcaggtccggctgccgacggcgccgatgagctgccggtgctgcgg
tggcaggcgcccaacgtcgagagcctggtccggtgcgcccagcgcttctttgagtggagc
ccagccacggtgctggcccgattccgctcgacgatctggagcggcctcgtgtttcgccag
ctgaggcaggaggtgctcgagcgtgacggcgacgacaagcatggcccgtgggccgagctg
gtagagagtcccgccagcaaggcggtccgccaggcggtccgggagagcggcggcggtggc
gctggcagcggcggcaaggcgaaaacagcgatggccaccgccacagccacggccacggcg
acgacagcggcaagtcgggttctgggtcccgtcagccccgctccaaagaggagcaagccg
ctgcacgagagcccgcaggcgacgcgcatcaccgactttttcgcaaaggcgagcctgtcg
tcgccatcgtcgtcgggcaggatcgccaggggtgcgtgcagcgatggcccatcaccgccg
acgagactgtcgagccgggacgactcgagcgccgacgctgctccaccgccacggcagccc
ggcgacatcgacatcgtctcgatcagccgacgacgtcgcaacgtcgcgctcggcgagcac
gtcgaatgccgcgcgctcgtcgacgtgtcgcccatggtcgagctggcggaaaagtggatc
gacgagtcggtcgggcgcgaacgcggcgctgtgccagctagcgacgagcagggcgtcgag
cgaggcagcgaggcagagggcgatgagagagaccacgacggcgagacgggcccgaccagg
aagccggtggatcctcgcgagccgctcctgctctggatcgtcgagagcctgttggaacga
gggcggagcggacaggcggctctggccgagtttcgtcgcaagacggcggcggtggagcgg
gaaaaggcggcaaaggcgcggtcgaaggcgcgctcgaaggccggtgccgatacgatggcc
gagccggggcgggtatcgcgacgtggtcagccgccgtcgtcgcagccgcaggtgccgggg
caggggcaggggcagcagcggacgatccgagagtttatgaaggccaacaagggcaaggcc
acgttgcagcagcggcgaggggaagacgcgacgtcgtcgttgccctcgagggcgatcaag
acgacgacgatgtag
DBGET
integrated database retrieval system