Pseudozyma flocculosa: PFL1_02404
Help
Entry
PFL1_02404 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_02404
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFL1_02404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP214
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
19316524
NCBI-ProteinID:
XP_007878107
LinkDB
All DBs
Position
Unknown
AA seq
2321 aa
AA seq
DB search
MSMSYSEAEAGEQEVNYLVLRQLAKDVNVRLSDPLQGSQSQASANLLALSNPKGLAFAAT
TQGFIVLQLSTLRTFFKAAARNTSPRVSEPLRTVDTTSEGKPAASKVTFLRTGNADASLV
VGFESGAIAAWDIDGLVSGSRLDPAFVLQPPSADLKLLELAPNPSDRPELCVALYSQPGA
AGIDAGTAIVLDITKGSWGSQLNPDASVRTSSLCWSVKGKQIALGLEDGEILQITPEGEA
KDRIAKPSSLDGPYYISDIRWLENHAFVTTYNQPSSSEQEPEHSYEVYAVLRDPKAKQVT
FAKFPADPAPPYGDTSRKGNRYVAWLKGWEPAKHLVFVGSSPSTDVGLLGCSSEGGGAAA
WSIMELDETSRPILPFSSLDKSSDTAPVGLELDLTATDEIEDPNAAARGDGNDKMPAVPV
LYVYTSDGVLLAYDVINTQGGPFPGMSQGQAASAASSTPAPAQATPAPEATPSAPSTPSA
FGQTSKPSAFGQTSTPSAFGQTSTPSAFGQTSTPAFGRSTAFQAPLQTPSPFAAPAKPEG
TPNEPKGSTAAQWGSAARTTSNADASARPSGFGSTGFGFGFSSQSTSASTPATPAAADKP
AAPASPFVTGSATTPSTPSTAAAATSSTTMITTPAPAFGSTSAFGQTSSPSPFAKPAFGQ
SSGFGSTSAFGKSAFGSAAASPFASTPTTPAAKAEASTAGSSGFGGFASSTSSGGGFGSF
ASKGTSAFASATSPSSPGSVFGGGGKLETSTTPSKPFGGSAFGAPSAFGSTSTPTSAFTT
SASAFGATSGSAFATNKAAEEKDKVGSATDDAKDAGPGSGGSFSFGGLDDMLGGGKDEKK
MEGADGKQPGGKKSDSAASSPDSGVNTVVSAPSTQAPAFSFNKAAEGDKKPTASAFSFGG
TGAAPQPSSSSSSSSTTATATAEAGRATSPPAPSPAFSSFKPGFGAGSSFGNQPFSFGGA
QNGQQKAGGTSAFGFGAGAAKDGAQKPVSAFAPVVNGQTKTLEGKEDQEKPVEEQDKTPV
QEPAEFAKEEAPESVEDKSAESKEAPSPLAGGQDKAASPATEAKESSAKSDEAPAKPAFS
FAPKPQEKVGGQDVPAKSAFSLPPAQPSEDKKEDGAGAASKLPISPSPTSGSADKKDAAA
PSAFSFAPSPAPGAEATAAPKSPFSFAGGKPVEAGGKQDKKSEEPAKSPFGSFGKPAAGT
ADSATPKFSFGPKPTISAATDETKKDAVPTPAFGLGSQPAATLSFGSKPSTPTAGFSFGK
PAEKKDEGGQDRAVRASTTPPDSPRKPAGAPPPLTFGQPAEADQPVKVKEEPQSPPDLSK
PPTPSPFAGFGKPADQGAAQQAAKPAESPAAAATPSSPFGSFGQTQQSGGGFSFGKPAEA
PKPVTSPPADQGGAGAKPQQNFLGFNSRAPRSSSPLAGAPVTSDDLSKSPEKAQAGIKPP
ATPSGEPKPAFSFGNFAPKPAAPSPLGQPSFGGFGQAAAPATFAPPQQQKQPAGAAPQKP
SFSFGPSPGAPQTSSTPASQPAFGGTGGGMFGKPASGAFGAAAIPPAQPAKAPLVSGQAP
QLGGGVSQLQPGEVTEKGIQGEFLKAYLILTKELGVLRGNVNQCAAFLAQLRQPTGLPES
TADFGDASKWSFGDLQKMLELTRRLESETGQLEDKSTGQKRQLAELQSLQLKAEAKREEL
ARFIRARSDPEFAKIVRVRQLGPEHVENQNRLRKTSQLVRDRMQELDEYLALLKNRITNE
KLGRSTMRAPTLDSIARATRNITAMASDRVLELDHLALQLDMLRVRPGSAAAGQRLRDTR
SMTASMVSNRFARSSTAAPAAPFESVASLADSLPSAGSGAVAANSANRAASAALRAERAK
REAKDVFIAARSEPLLNRTAVPGQQGRRAPTKPFESSDLQIAFAKGPVHLAQRPPPPPSQ
QQPQSQPQEVSQAPVAASSTGSPPPPTDGGRPRFAPPSPAKPLSAYSSPTQPFGSLPAPQ
QQSQKQQSSFGGFGSSPLTPLKFGAPPAAGIFDLPPEEKPFMPGARPNEGGTAARGHHAA
KSKPRSSIAVSLPPATARAGSPGSPAGPAKVSDFFASPPAGGSSAAAAAPAPAKPPVFSG
FKNVGGGFGSLGSSTATSSPAASPAGSGTPFSFGTKGASASPAPGAAGGGSSKVDKKGGG
FSFASPATKAEPVTFGGLQQPKPVPGAASGVAGEAGEAAVAEAAAPSGSSQGDEAEESYG
LEGDEDEDEDEDDDDYEDEDDDEDYDEDYNDEDEDDDGEGYEDEGEDGVEVEVAAGEGEA
EGEGDEEGLSAVEEEEEEEEEDEDEDEDAEGDVPSSDTVKA
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagctactcagaggcagaggcgggcgagcaagaggtcaactacctcgtcctc
cgccagctcgcaaaggacgtcaacgtcaggctctctgatccgcttcagggctcccagtct
caggcctccgcaaacctcctcgccctctccaatccaaaaggcctcgctttcgccgccacc
acccagggcttcatcgtcctccagctctcgaccctccgcacctttttcaaggccgccgca
cgaaacacttccccccgcgtctcggaacccctccgcaccgtcgacaccacctcagagggc
aaacccgccgcatccaaggtcacgttcctccgcacgggcaatgccgacgccagcctcgtc
gtcggcttcgagagcggcgccattgcagcctgggacatcgacggcctcgtcagtggatcg
cgcctcgaccccgcattcgtccttcagcccccctcggccgacctcaagctgctcgaattg
gcgcccaacccctccgaccgacccgagctctgcgtcgccctctactcgcagcccggcgcg
gccggcatcgatgcgggcaccgccatcgtcctcgacatcacaaaggggagctggggctcg
cagctcaacccagacgccagcgtacgcacctcgagcctgtgctggtcggtcaagggcaag
cagatcgcgctcggcctcgaagacggcgagatcctccagatcactcccgaaggcgaggcc
aaggaccgcatcgccaagccctccagcctcgatggcccgtactacatctccgacatccgc
tggctcgagaaccatgcctttgtcacgacatacaaccagccgtcgtcgagcgaacaggag
ccggagcactcctacgaggtctacgccgtgctgcgcgaccccaaggccaagcaggtcacg
tttgccaagttccccgccgaccccgccccgccgtacggcgacacctcacgcaagggcaac
cgctacgtcgcctggctcaaaggatgggagccagccaagcacctcgtctttgtgggtagc
agcccgagcaccgacgtcggcctgctcggctgctcgagcgagggcgggggcgcggccgcg
tggtcgatcatggagctcgacgagacctcccggcccatcctgcccttctcttcgctcgac
aagtcgtcggacacggcgcccgtcggcctcgagctcgacctgacggcgaccgacgagatc
gaagaccccaacgcggcggcgcgcggagacggcaacgacaagatgccagcggttcccgtc
ctctatgtttacacctcggacggcgtgctgctggcctacgacgtcatcaacacccagggc
ggtcccttcccgggcatgagccagggccaggccgcctcggccgcctcgtccacaccggcg
cccgcacaagcgacgccggcaccggaggccacgccttccgctcccagcacgccctccgcg
tttggccagacgagcaagccatctgcattcggacagaccagcacgccatctgcgttcgga
cagaccagcacgccatctgcgttcggacagaccagcacgccggcgttcggacgcagcaca
gccttccaagcgcccctgcaaacgccctcgccgtttgctgctcctgcgaaacctgagggc
acgccaaacgagccaaagggcagcacagcagcacaatggggatcggctgcacgcacgaca
tcaaacgccgacgcgtccgcccgcccctctggctttggctcgacgggctttggcttcggt
ttcagcagccagagcacctccgcatcgacccctgcgacgcctgcagcagcagacaagccg
gccgccccggcttctcctttcgtcaccggtagcgcgaccacgccgtccactccgagcacg
gcggctgcggcgacgtcgtcgacgacaatgataacgacgcctgcacccgcattcggctcg
acctctgcctttgggcagacgtccagcccgtcgccgttcgccaagccagctttcggacag
agctccggcttcggcagcacatctgccttcggcaagtcggcatttggctctgccgccgcc
agcccttttgcatccacgcccacgacgcctgccgccaaggccgaagccagtaccgcgggc
agcagcggcttcggcgggtttgcgtcaagcacgagcagcggcggaggcttcggaagcttt
gcttcgaaaggcacgagcgcattcgcctcggctacatcgccatcgagccccggctccgtc
tttggcggcggaggcaagctcgaaacgagcacgaccccctcgaagccgttcggcggatcc
gcctttggcgcgccctcggcgttcggtagcacgtcgacgcccacttcggccttcaccaca
tccgcatccgcctttggcgccaccagcggctccgcattcgccaccaacaaggccgccgag
gaaaaggacaaggtcggatccgctaccgacgatgccaaggacgcaggaccgggcagcggc
ggaagcttctcgttcggagggctcgatgacatgctcggtggcggcaaggacgaaaagaag
atggaaggcgcggatggcaagcagcccggcggaaagaagtccgactccgcggccagctcg
ccggactcgggcgtcaacacggtcgtctcggcgcccagcacgcaggcgcccgccttctcc
ttcaacaaggccgcagagggcgacaagaagcccaccgcgtctgcgttctcgttcggcggc
actggcgccgccccgcagccctcctcttcctcgtcgtcttcctcgacgaccgcaactgcg
accgccgaagcgggtcgagccacctcgccgcctgcaccctcgccggcgttcagcagcttc
aagcctggattcggtgccgggagcagtttcggcaaccagcccttctcgtttggcggtgcg
cagaacggccagcagaaggcgggcggcacgtctgcctttggcttcggcgcaggcgccgca
aaagacggcgcgcagaagccggtctctgccttcgcccctgttgttaatggccagaccaag
accctcgaaggaaaggaggaccaggagaagccggtcgaggagcaggataagacaccggtc
caggagcccgccgagttcgccaaagaagaggctccggagagcgtcgaggataagagtgcc
gagtcgaaagaggcaccctcgcccctggcaggcgggcaagacaaagcagcgtcgccagcg
accgaagccaaggagtcgtccgccaagtctgatgaggcacctgccaagccggccttcagc
ttcgcgccgaagccgcaggagaaggttggcggtcaggacgtccccgcgaagtcggccttc
tccctccctccggcccagccttctgaggacaagaaggaagatggagctggcgccgcctca
aagctgccgatctcgccttcgccgacgtctggttctgcggacaagaaggacgccgcggcc
ccgtctgcattctcgtttgctccctcacctgcacctggagcagaagcgactgccgcgccc
aagagccccttctcgtttgccggtggcaagcccgtcgaggctggtggaaagcaggacaag
aagtcagaggagcccgccaagtcgcccttcggcagcttcggtaagcccgccgccggcacg
gccgattctgcgactccgaagtttagctttgggcccaaacccaccatctcggccgcgacc
gacgagacgaagaaggacgccgtgccgacgcctgctttcggcctcggctcgcagcctgcg
gcgaccctgtcgtttggcagcaagcctagcaccccgacggcgggattctcgttcggcaag
cccgccgagaagaaggacgaaggcggacaggacagagcggtgcgtgcttcgacgactccg
ccggactccccgcgcaagccggctggcgccccgccgcctctgacctttggccagcctgcc
gaggcggaccagccagtcaaggtcaaggaagagccacagagcccgccggatctgtccaag
ccgccgactccgtcgccttttgccggtttcggcaagccggcagaccagggcgcggcgcag
caggctgccaagcccgctgagtctcctgccgcagctgctaccccatcgtcgccgttcggc
tcctttggacagacgcagcagagcggtggaggcttcagctttggcaaacctgccgaggct
ccgaagcccgtaacctcgccgccggccgatcaaggcggcgcgggtgccaagccgcagcag
aacttcctgggcttcaactcgcgtgcgcctcgaagcagctcgccgcttgcaggtgcgccc
gtcaccagcgacgacctgtcgaaatcgccagagaaggcccaggctggcatcaagcccccc
gcgacgcccagtggcgagccaaagcccgcgttcagcttcggcaacttcgcgcccaagccc
gccgcaccttcgccgctcggtcagccgtcctttggcggcttcggtcaggctgctgccccg
gccaccttcgccccgcctcagcagcagaagcagccggctggtgccgcccctcagaagccg
agcttctcattcggaccgagcccgggcgcaccgcagacttcatcgacaccggcttcccag
cctgcctttggcggtacaggcggcggcatgtttggcaaacccgcgtcgggcgcattcggc
gcggcagcaatccctccggcccagcccgcaaaggccccgctcgtgtcgggtcaggcaccg
cagctcggtggcggcgtctcgcagctgcagccaggcgaggtgaccgagaagggcatccag
ggcgagttcctcaaggcctacctgatcctcaccaaggagctcggagtgctccgcggcaac
gtcaaccagtgcgccgccttcctggcccagctgcgacagccgaccgggctgcccgagtcg
acggccgactttggcgacgcctccaagtggtctttcggcgatctgcagaagatgctcgag
ctgacgcgccgcctcgagagcgagacgggccagctcgaggacaagagcacgggccagaag
cggcagctggccgagctgcagagcctccagctcaaggccgaggccaagcgcgaggagctg
gcgcgcttcatccgcgcccgcagcgaccccgagtttgccaagattgtgcgcgtgcgccag
ctgggcccggaacacgtcgagaaccagaaccggctgcgcaagacgtcgcagctggtgcgc
gaccgcatgcaggagctcgacgagtacctggcgctgctcaagaaccgcatcaccaacgag
aagctcggtcgctcgacgatgcgcgcgcccaccctcgactcgatcgcacgcgccacgcgc
aacattacggccatggccagcgaccgcgtgctcgagctcgaccacctggcgctgcagctc
gacatgctccgggtcaggcccggttccgccgctgccggccagcggctgcgtgacacccgg
tccatgacggcatcgatggtctcgaaccgcttcgcccgctcgtcgacggccgcacccgcg
gcgccattcgagtcggtcgcctcgctcgccgactcgctgccctctgccggatcgggcgcc
gtcgctgccaattcggccaaccgagccgcctcggccgcgctgcgcgccgagcgcgccaag
agggaggccaaggacgtcttcatcgcggcccgctccgagccgctgctcaaccgcaccgcc
gtgcccggccagcagggccgacgcgcacccaccaagccgtttgagagctccgacctccag
atcgcattcgccaagggccccgtccaccttgcccagcgtccgcctccaccgccatcccag
cagcagccgcagtcgcagccgcaagaagtgtcccaggcgcccgtggctgctagttcgacc
ggctcgccgccgcccccgaccgacggaggcaggccgcgattcgctccgccgtctccggcc
aagcctctgagcgcctattcgtcgcccacgcagccgtttgggtccctgccggctccccag
cagcagtcgcagaagcagcagagcagcttcggtgggttcggaagctcgccgctgacgccg
ctcaagtttggcgcgccgcccgcggctggcatctttgacctaccgcccgaggagaagccg
ttcatgcccggcgctcggcccaacgaaggcggcacggcggcgcgtggccatcatgcagcg
aagtcgaagccgaggtcgagcattgccgtctcgctgcctcctgccactgcgagggccgga
tcgccgggctcgcccgctgggccggccaaggtgtcggactttttcgcctcgccgcccgcg
ggtggatcgagcgccgcggccgcagctcctgcccctgccaagcctccggtgttttccggg
ttcaagaatgtcggtggcggctttggcagcttgggatcttcgacggcgacatcgtcgccc
gctgcctctcccgctggctctggaacgccgttctcttttggcaccaagggggcttccgct
tcgcccgcgcctggcgctgctggaggaggctcgtccaaggtcgacaagaagggcggcggc
ttcagcttcgcgtcgccggccaccaaggcggagccggtcacgtttggcgggctgcagcag
cccaagccggtgcctggcgccgcgtccggagtggcgggcgaggcgggcgaggcggccgtg
gcggaggcggcggctccatctggctcgtcccaaggcgacgaggccgaggagagctacggc
ctcgagggcgacgaggacgaggacgaggacgaggacgatgacgactacgaggatgaggac
gacgacgaggactacgacgaagactacaacgacgaggacgaagatgacgacggggagggc
tatgaagacgaaggcgaggacggggtcgaggtcgaggtggccgcgggcgagggcgaggct
gagggcgagggcgacgaggaaggcctgtcggcggtcgaggaggaggaagaggaagaggag
gaggacgaggacgaggacgaggacgcggaaggggacgtgcccagcagtgatacggtcaag
gcctga
DBGET
integrated database retrieval system