Pseudozyma flocculosa: PFL1_05605
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Entry
PFL1_05605 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_05605
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFL1_05605
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
Pre-60S particles
Helicases
PFL1_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-GeneID:
19319694
NCBI-ProteinID:
XP_007881331
UniProt:
A0A061H4S7
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MAQQLAHAPSYAGKWSRLKPSLTPWVASLLADMNFEQMTPVQASTIPLFLSHKDVIVEAV
TGSGKTLAYVIPTIEMLLRKGATLKRDELGALIVCPTRELAQQVYGIVKMFLDAQERAAD
AQGAAEADAETDGQKDEGDEDKEQNEDGGAQPKISGVQLVIGGTKSNPAQDYAAFKDNGP
DILVGTPGRLEELLTRKGVKKNELEVLVLDEADRLLDLGFSENLHNILNLLPRQRRTGLF
SATMTDALSELARMGLRNPVRVVVKVEAKGDKRGVGALDASRRIPATLQNTFQVSRAENK
MAQLLRILRYESSEDGLGGGARKFIVYFATCAQVNYFYKVLSRLKRVKGLAFYALHGKQT
SSKRTATFKEFTSSTPAPGTSEQASVLLCTDVAARGLDLPDVDIVVQYDAPTDPKVFSHR
CGRTARAGRRGRAILLLTRGREEDYVEFLAVKKIPLQPYPYLVHRPASPLRPEPGLEPGT
ASGSGSGSVGGGQVEIAVDDDARALEDEMRGAVRRDRDLYELGMVAFVSFVRSYSKHEAV
YIFRTADLDFHGLARSFALLRLPRMPETKAATAAADKGKARAAKQSDDEAAATPPTVAAG
AASDEAETSASASAATVSASVPAAPRRLGWHDEEVDLRTYAYADKAREKQRLVNLELEDQ
RRAERPEEVEAEEARKRRAHLGVKGEAAIKADEAWSKQKLRKQKRDARKLHKERKKAYLK
RVREGGEQGHDGSAPGDSGDADEAGQGGQGAPTATATATATAARGTARGGGGDDDDDEGD
DWAEEEREAKRQRKEGKAKNGRGAMQFDFDGL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacagctcgcacacgccccgtcctacgcgggcaagtggagccgcctgaagccg
tccctgacaccatgggtcgcttcgctgctggccgatatgaactttgagcagatgacgccg
gtgcaggcctcgaccatcccgctcttcctctcgcacaaggacgtcatcgtcgaggccgtc
acgggctcgggaaagacgctggcctatgtgatccccacgatcgagatgctcctgcgcaag
ggggccactctcaagcgcgacgagctcggcgccctcatcgtctgccccacgcgcgaactg
gcgcagcaggtctacggcatcgtcaagatgtttctcgacgcccaagagcgcgccgccgat
gcccaaggggcggcggaggcggacgcggagacggatggacagaaggacgaaggagacgag
gataaggagcaaaacgaggacggcggtgcacagccaaagatctcgggcgtccagctcgtc
atcggaggcaccaagtccaacccggcgcaggactacgccgcgttcaaggacaacgggcca
gacatcctcgtcgggacacctggaaggctcgaggagctcctaacccgcaagggcgtgaag
aaaaacgagctcgaggtgctcgttctcgacgaggccgacagactgctcgacctgggcttt
tccgagaacctgcacaacatcctcaacctcctccctcggcagcggaggaccggcctgttc
agcgccaccatgaccgacgccctctcggagctggcacgcatgggcctgcgcaacccggtc
cgcgtcgtggtcaaggtcgaggcaaagggcgacaaaaggggcgtcggtgccttggacgct
tcccgcaggatcccagcgactctgcagaacacgttccaagtctcgcgcgccgaaaacaag
atggcgcagctgctccggatcctgcgctacgagtcgtccgaggacgggctcggaggcggc
gcgcgcaagtttatcgtctactttgccacctgcgcccaggtcaactacttctacaaggtc
ctgagcaggctgaagcgggtcaaggggctcgccttttacgctctgcacggcaagcagacg
tcgtcgaagcgcacggcgacgttcaaggagtttacctcgtcgacgccggcgccgggcacg
tcggagcaggcgtcggtgctgctgtgcaccgacgtggcggcgcgcggcctcgacctgccc
gacgtcgacattgtggtgcagtacgacgcgcccaccgaccccaaggtctttagccaccgc
tgcggccgcactgcgcgagcgggacggcggggccgcgccatcctgctgctgaccaggggc
cgcgaagaggactatgtcgagttcctcgccgtcaagaagatcccgctgcagccctacccc
tacctcgtccaccgtccggcgtcgccgctcaggcctgaaccgggcctcgagcccggcacg
gcaagcggcagcggcagcggcagcgtcggaggcgggcaggtcgagatcgcggtcgacgac
gacgcccgggcgctcgaggacgagatgcgcggcgcggtgcgcagggaccgcgacctctac
gagctcggcatggtggcctttgtctcgtttgtgcggtcctactccaagcacgaggccgtc
tacatcttccgcacggccgacctcgacttccacgggctggcgcgctcgtttgcgctgctg
cgcctgccgaggatgcccgagaccaaggcggcgacggcagcggccgacaagggcaaggcc
agggccgccaagcagtccgacgacgaggcggcggcaacgccgccgacggtcgcggcaggc
gcggcatcggacgaggccgagacctcggcatcggcctcggcagccaccgtgtcggcttcg
gtcccggccgcgccccgtcggctcggttggcacgacgaggaggtggacctgcgcacgtac
gcctacgccgacaaggcgagggaaaagcagcggctggtcaacctcgagctcgaggaccag
cggcgcgccgagcggcccgaagaggtcgaggccgaggaggcgcgcaagcggcgcgcgcac
ctgggcgtcaagggcgaggcggccatcaaggccgacgaggcgtggagcaagcagaagctg
cgcaagcagaagcgcgacgcgaggaagctgcacaaggagcgcaaaaaggcctacctcaag
cgcgtcagggagggtggcgagcagggccacgacggcagcgctccgggcgattccggcgat
gccgacgaggcggggcagggcggtcagggagcaccgacggcgacggcgacggcgacggcg
acggcggcgcgagggacagcgagaggcggcggcggcgacgacgacgacgacgagggcgac
gactgggccgaagaggagcgcgaggccaagcggcagcgcaaggagggcaaggccaagaat
ggccgcggcgcgatgcagttcgatttcgacggcctctag
DBGET
integrated database retrieval system
