Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_00540
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Entry
PFREUD_00540 CDS
T01252
Symbol
rmlC_(cps)
Name
(GenBank) dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr00521
Streptomycin biosynthesis
pfr00523
Polyketide sugar unit biosynthesis
pfr00541
O-Antigen nucleotide sugar biosynthesis
pfr01100
Metabolic pathways
pfr01110
Biosynthesis of secondary metabolites
pfr01250
Biosynthesis of nucleotide sugars
Module
pfr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PFREUD_00540 (rmlC_(cps))
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PFREUD_00540 (rmlC_(cps))
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PFREUD_00540 (rmlC_(cps))
Enzymes [BR:
pfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
PFREUD_00540 (rmlC_(cps))
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PFREUD_00540 (rmlC_(cps))
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GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
NAD_binding_4
GDP_Man_Dehyd
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
CBL55554
UniProt:
D7GHI2
LinkDB
All DBs
Position
complement(66685..68169)
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AA seq
494 aa
AA seq
DB search
MRRRGTDTMALDHEKQLAATTTPIPGFLVFDLTVHGDNRGWFKENWQRAKMTALGLPDFG
PVQNNISFNDEVGVTRGIHAEPWDKFISVATGRVFGAWVDLREGPSFGTVFTCEIDPGVA
VYVPWGVGNAYQTLEPNTAYTYLVNAHWSPEAKYTFLNLADETVAIDWPIALDDAILSDK
DRAHPRLDAVTPFPPAMPRVLVTGAHGQLGRALMAQLPDAGFLPVGVDLDKLNIADRASV
DAYDWSTVDVIVNAAAWTDVDGAETAQGRPRAWAANATGPANLARVATEHGLTLVHISSE
YTFDGTRAPHREDEMPSPLGVYGQSKAGGDAAVAATPRHYLVRTSWVVGEGKNFVRTMVD
LAGRGIAPKVVDDQVGRLTFTTDLAAGIIHLLRHGAAWGTYNLSNEGTPLSWAAVAKRVF
ALSGHDPQDVSPISTAEYFAGKDAAPRPADSTLDLTRIEATGFRPPSMEERLDAYVAQLR
RDGSGQQPTVNRPD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcaggggcactgacaccatggcgcttgaccacgagaagcagctggccgccacc
accaccccgattccgggcttcctggtgttcgacctcaccgtgcacggcgacaaccggggc
tggttcaaggagaactggcagcgcgccaagatgaccgcgcttggtctgcccgacttcggc
ccggtgcagaacaacatctcgttcaacgatgaggtgggcgtcacccgcggcatccatgcc
gagccctgggacaagttcatctcggtggccaccggccgcgtcttcggcgcctgggtggac
ctgcgcgagggtcccagcttcggcaccgtgttcacctgcgagatcgatcccggcgtggcc
gtctacgtgccgtggggcgtgggcaacgcctaccagacgctggagccgaacaccgcctac
acctacctggtgaatgcgcactggtcgcccgaggcgaagtacaccttcctcaacctggcc
gatgagaccgtggccatcgactggcccattgcgctggacgacgcgatcctgtcggacaag
gaccgcgcccatccgcgcctcgacgcggtgacgcccttccccccggcgatgccgagggtg
ctggtgaccggtgcccacggccagctgggacgcgcgctcatggcgcagctgcccgatgcc
ggcttcctcccggtgggcgtcgacctcgacaagctcaacatcgccgaccgggccagtgtg
gacgcctacgactggagcaccgtcgacgtcatcgtgaatgcggcggcctggaccgacgtc
gatggtgccgagaccgcccagggcaggccgcgggcatgggccgcgaacgccaccgggccg
gcaaacctcgcccgggttgccaccgagcacgggctcacgctggtgcacatctcgtcggaa
tacacctttgacggcacccgggcaccgcatcgcgaggacgagatgccgagccccctgggc
gtctacgggcagtcgaaggccggcggcgacgccgccgtggccgccacgcccaggcattac
ctggtgcgcaccagctgggtggtgggcgagggcaagaacttcgtgcgcaccatggttgac
ctggccgggcgcggcatcgcccccaaggtggtggacgaccaggtgggacgcctcaccttc
accaccgacctggccgccggcatcatccacctgctgcgccacggcgccgcctggggcacc
tacaacctgtccaacgagggcaccccgctgagctgggccgcggtggccaagcgcgtcttc
gccctgagcggccacgacccgcaggatgtgtcaccgatcagcacggcggagtacttcgcc
ggcaaggacgccgcaccgcgccccgccgacagcacgctggacctcacccgcatcgaggcc
accggcttccgtccgccctccatggaggagcgcctggacgcctatgtggcgcagttgcgc
cgggacgggtccggacaacagccgacagtgaaccgccctgattga
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