Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0158
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Entry
RM25_0158 CDS
T03860
Name
(GenBank) Cell envelope-related transcriptional attenuator
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
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Gene cluster
GFIT
Motif
Pfam:
LytR_cpsA_psr
DUF3112
Motif
Other DBs
NCBI-ProteinID:
AJQ89892
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Position
complement(196842..199460)
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AA seq
872 aa
AA seq
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MGDMADDDVQRPRRVRRAADDAHSATPPASGTPGTPRRIWARPQPEDPPTTPPAAPEAPA
APSTPADPTPTGGSSRRGMGTNEPHVSKWGTRESTPEPTASATPRRSWSRRRAESTGDQP
PVGSGHPTGEGTGPRHARRSAPIHKPVESDLSHPDAPRSTAAADATTPSPAPAEQAPTRP
APPAAATPRGRQHDAPTPRASAPDKHVASRRTPATTPPAAATPHSAAPHSPAPHDPTPPS
PTTHAPTPGTPTAPRSERGANLTLGGEPLGEHTAFLHAPDYRHANAAPGRADAAARAAAR
ERARRAAAGTEPAAHDGELFDVEQVGLREPPPPPPEPEPASLRSRFAAFTERSDDTGSHG
FGWTMLRTTLGSLIPGAGLIGTRLTMIGTLLFMMTVVFGSGVILAAVVHPPALMATVMNS
VGLTAIGIMLVAVTIIWMAIVAGTYLVTRPRRMKRWQRIAGAIVVFLMAALVGSVSSVGA
AYAFESAIVVSDVFGNSKTRSQTRPLGDWANKDRVNILLLGGDSGADRDEDLGLRTDTVM
LASINTHTGNTVFIQLPRNLENVPFPAGSDLAKVYPNGRVWDRSSGTEDNYMLNAVWNEV
PLEHPELFRNTDQPGADATKLAVSGITGLTVDYYAMINIDGIQALVDAMGGVVVNINFPI
AKGGHVDGYGDEECGVDGNLSVGPDQKLDGADAMWYARSRCNDPDYDYGRMRRQSCLVNA
IIRQANPQTMLTRYEAIAAAGKNMMSTDIPESLLDDATNLALQVKDAQVSRVVFSQAIGT
APQVGDINPGNPDYNAIRNRISGAITASDNGTTPSAPASASSSPMATGSAGSASSVASAA
GSGSTSASAAGAAATPSGTAENMSGACDYHPN
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacatggcagacgacgacgttcagcgaccccgcagggtccggcgcgccgccgac
gatgcacactccgccacgccccccgcgtccggcaccccgggcacgccgcggcgcatctgg
gcccgcccgcagcccgaggacccgccgaccacccctccggcagcccccgaagcgccggca
gccccttccacaccggcagatcccacgcccaccggcggctcctcgcggcgcggcatgggc
acgaacgaaccccacgtcagcaagtggggcacccgcgagtcgacgccggagcccacggcg
agcgccacaccgcgccgctcctggtcgcgtcgacgcgccgagtccacgggagaccagccc
ccggtcggatcgggccatcccaccggcgagggcacgggtccgcgccacgcacgccgctcc
gcgccgatccacaagccggtcgaaagcgacctctcccaccccgatgccccccgcagcacc
gccgccgcagatgcgacgacgccatcccccgccccggccgagcaggcacccacgcgtccg
gcaccgccagccgccgcgacaccccggggacgccaacacgacgccccgaccccacgtgcg
tccgcacccgacaagcacgtagcctcccggcgcacgcccgcgaccacgcccccggccgca
gccacgccgcacagtgccgcaccccacagcccagcaccccatgacccgacgccccccagc
ccgacgacccacgcccccacacccggcacaccgaccgcgccccgctccgagcggggcgcc
aacctcacgctgggcggtgagccgctcggcgagcacaccgccttcctgcatgcccccgac
taccggcatgccaacgccgcaccgggcagggccgacgccgccgcccgggccgcggccagg
gagcgcgcccgacgcgccgcagccggcaccgaacctgccgcacacgacggcgaactgttc
gacgtcgagcaggtggggctgcgcgaaccgccaccgccaccgcccgaacccgaaccggcc
tcgctgcgcagtcgcttcgccgcgttcaccgagcgcagcgacgacaccggctcgcacggc
ttcggctggacgatgctgcgcaccacactcggctccctgatccccggcgccggcctgatc
ggcacccgcctcacgatgatcggcacgctgctgttcatgatgacggtggtcttcggctcc
ggcgtgatcctggccgccgtggtgcacccgcccgcgctgatggccaccgtgatgaactcg
gtgggcctgaccgccatcggcatcatgttggtggccgtcacgatcatctggatggccatc
gtcgccggcacctacctggtgacccggccgcggcgcatgaagcgctggcaacgcatcgcg
ggcgccatcgtcgtcttcctgatggccgccctggtgggctcggtgagttcggtgggcgcc
gcctacgcgttcgaatcggcgatcgtcgtcagcgacgtcttcggcaactccaagacccgc
tcgcagacgcgtccgctcggcgactgggccaacaaggaccgggtgaacatcctgttgctg
gggggcgactcgggcgcggaccgcgacgaggacctcggcctgcgcaccgacacggtgatg
ctcgcgtcgatcaacacccacaccggcaatacggtgttcatccagctgccccgcaacctc
gagaacgtgcccttccccgccggcagcgacctggcgaaggtctaccccaatggacgcgtc
tgggaccggtcgtcgggcaccgaggacaactacatgctcaacgcggtgtggaatgaggtg
ccgctggagcatccggagctgttcaggaacaccgatcagcccggcgccgacgccacgaag
ctggccgtcagcggcatcaccgggctcaccgtcgactactacgcgatgatcaacatcgac
ggcatccaggcgctggtcgacgccatgggcggcgtggtggtcaacatcaacttcccgatc
gccaagggtggccatgtcgacggatacggcgacgaggagtgtggcgtcgacggcaacctg
tcggtggggcccgaccagaagctcgatggcgccgatgccatgtggtacgcccgcagccgc
tgcaacgaccccgactacgactacgggcgcatgcgccggcagagctgcctggtgaatgcg
atcatccggcaggccaatccgcagaccatgctcacccgctatgaggcgatcgcggccgcc
ggcaagaacatgatgagcaccgacatccccgagagcctgctcgacgacgccaccaacctg
gccctgcaggtgaaggacgcccaggtgagccgcgtggtgttctcgcaggccatcggcacc
gccccgcaggtcggtgacatcaatccgggcaaccccgactacaacgcgatccggaaccgc
atctccggtgccatcaccgccagcgacaatggcaccacgccgtcggcgccggcatcggcg
tccagctcaccgatggccacgggcagtgcgggatcggcgagcagcgtcgcatcagcggcc
ggcagcgggtcgacgagtgccagcgcggccggtgcggcagcaaccccgtccggcaccgca
gagaacatgagcggtgcctgcgactaccacccgaactga
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