Pyrococcus furiosus DSM 3638: PF2055
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Entry
PF2055 CDS
T00075
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pfu
Pyrococcus furiosus DSM 3638
Pathway
pfu03410
Base excision repair
pfu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PF2055
03430 Mismatch repair
PF2055
03440 Homologous recombination
PF2055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfu03400
]
PF2055
DNA repair and recombination proteins [BR:
pfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PF2055
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PF2055
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PF2055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
CDC45
Motif
Other DBs
NCBI-ProteinID:
AAL82179
UniProt:
Q8TZE0
Structure
PDB
LinkDB
All DBs
Position
complement(1894803..1896236)
Genome browser
AA seq
477 aa
AA seq
DB search
MDKEGFLNKVREAVDVVKLHIELGHTIRIISHRDADGITSAAILAKALGREGASFHISIV
KQVSEDLLRELKDEDYKIFIFSDLGSGSLSLIKEYLKEKTVIILDHHPPENVKLEEKHIL
VNPVQFGANSVRDLSGSGVTYFFARELNEKNRDLAYIAIVGAVGDMQENDGVFHGMNLDI
IEDGKSLGILEVKKELRLFGRETRPLYQMLAYATNPEIPEVTGDERKAIEWLKNKGFNPE
KKYWELSEEEKKKLHDFLIIHMIKHGAGKEDIDRLIGDVVISPLYPEGDPRHEAREFATL
LNATGRLNLGNLGVAVCLGDEEAFRKALKMVEDYKREQIEARKWLLQNWNSEVWEGDHVY
VLYVGKSIRDTLVGIAASMAINAGLADPEKPVIVFADTDEDPNLLKGSARTTERALAKGY
NLGEALRKAAELVNGEGGGHAIAAGIRIPRARLAEFRKLIDKILGEQVSKGGDKSES
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagggttttttgaacaaggttagggaggctgtggatgtagtaaagctccac
atcgagttaggtcatactataaggataatctctcatagggatgcggatggaataacctct
gcggcaattcttgcaaaggctttgggaagagaaggagcgagctttcacatttcgattgtt
aaacaggtaagtgaagatcttttaagagaattaaaggatgaagattacaaaatcttcatt
ttttccgacctgggtagtggttctttaagtttgataaaagagtatcttaaggaaaaaact
gttataatccttgatcaccatcctccggaaaatgtgaagttggaagaaaagcatatactt
gttaatccagttcaatttggcgcaaatagcgttagggatctgagtggatctggggttaca
tacttctttgcaagggagctaaatgaaaagaatagggaccttgcttacattgcaatagtg
ggagcagttggggatatgcaagagaacgatggagttttccatgggatgaaccttgatatt
attgaagatgggaaatctctgggaattcttgaggttaaaaaagaattgcgcctgtttggt
agggaaactagacctctctatcaaatgctcgcatatgccacaaatccggaaattcctgaa
gttactggagacgagaggaaggccatagagtggttaaagaacaagggcttcaatcccgag
aaaaaatattgggaattaagtgaggaggaaaagaaaaagttacatgatttcctaatcatt
cacatgatcaagcatggagctggaaaagaggatatagataggctaataggagacgttgtt
attagtcccttatatcctgaaggggatcccaggcacgaggctagagaatttgctacccta
ttaaacgctacaggcaggttaaacttgggcaacttaggagtggctgtatgtttgggagat
gaggaggctttcagaaaggccctaaagatggttgaagactacaagagggagcaaattgaa
gcaagaaagtggctacttcaaaattggaacagtgaagtttgggagggggatcatgtttac
gtcttatatgtgggaaagagtattagagatactctcgttggaatagcagctagcatggcc
atcaatgctggactggcagatcctgaaaagccggttatagtgtttgcagatactgatgaa
gatccaaaccttctcaaaggttcagctagaacaactgaaagggctttagctaagggttac
aatttgggagaagctcttaggaaagcggctgagctagtgaatggggaagggggaggacac
gcgatagctgcaggtataagaattcccagggccaggttggcggagtttagaaaattaata
gataaaatccttggagaacaggtgagcaaaggtggagataaaagcgaaagctga
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