Pseudomonas simiae PCL1751: PF1751_v1c47020
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Entry
PF1751_v1c47020 CDS
T03766
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfw03016
]
PF1751_v1c47020 (truB)
Enzymes [BR:
pfw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PF1751_v1c47020 (truB)
Transfer RNA biogenesis [BR:
pfw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PF1751_v1c47020 (truB)
Prokaryotic type
PF1751_v1c47020 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AJP54395
UniProt:
A0A5E6T730
LinkDB
All DBs
Position
complement(5219990..5220907)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAVLPGFRGEIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgcaacgtcagcggcatcattctgctcgacaagcct
attggctttacctccaatgccgcgttgcagaaggtccgctggttgctcaacgccgaaaag
gccgggcacaccggcagcctcgatcccctggccaccggcgtactgccgttgtgctttggc
gaggccaccaagttttcgcagtacctgctcgattccgacaagggttacgaaaccctgatg
caactgggcaagaccaccaccacggccgacgccgaaggtgatgttctgcaggttcgcgac
gtgaccgttggtcgtgctgatattgaagctgttttacccggttttcgtggggaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatggccagcctctctacaagctggca
cgtgcgggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaatta
ctcgcctgtgaaggcgacaccgcccggttggccgtggactgcagcaaaggcacctatatt
cgtaccctggtggaagatatcggtgaaaagctcggttgcggcgcgtacgttgcagaactg
cgacgcacccaggccggtcctttcagcctggcccagacggtcacgctggaagagttggaa
gcggtacatgccgaaggcggcaacgaagcggttgatcgcttcctgatgccatcggacagc
ggtttgctcgattggccgttgctgcacttctcggagcatagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgccccgaagttcggcatggtacgtgtacaggatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgtatagcgccacgtcga
ctgattcggtcagaatga
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