Pseudomonas simiae PCL1751: PF1751_v1c54410
Help
Entry
PF1751_v1c54410 CDS
T03766
Name
(GenBank) Rhs-family protein
Organism
pfw
Pseudomonas simiae PCL1751
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
UPF0257
DUF6314
Motif
Other DBs
NCBI-ProteinID:
AJP55133
LinkDB
All DBs
Position
6015434..6019828
Genome browser
AA seq
1464 aa
AA seq
DB search
MSDALWAARMGDALTHTSMMADILGGVLEVAANVAITALATAAVAAAVGVTIATAGIGGC
ILGAVVGIVVGMAMSKTGADKGLSKMCESFANALFPPVVEATIAVGSTDTFVNSIPAARA
AGSIPSHVAPAGTELEQVPPEPDPEPRPEPGFLDMAEGFFSQLWRPTVATPAPGVVPALT
DMVLCARHPPMPPQLLAEGSDKVTINGQPAVRSGDRSMCDATVVSSGLISPNVTIGGGTV
VVQEIRSGKTPGVGLAIEALMMLKGAKGKTLSNLPCMLLAGVTSYAVSQAMGAAANATMG
SPNPVHAATGAKVLGGETELDFVLPGILPIDWQRFYNSRDERRTGMFGAGWSVPYEISVE
ILLHPDGGEELLYTDEQGRRINLGGISLGSAMFSPGEGLSIRRHRNGQLLIESADGIYRL
FESTPANVSLLRLTQLGDRNDHRIHLNYDAAGRLVQLHDNLDLVQVELIRDQGHVSKIER
VYPDQRREVLVSYSYNATGDLTEVRDATGQIQRRFSYDAGRRMVEHQLPAGLRCFYEWAL
VEDVEWRVSHHWTDEGDAYHFEYDLSAGITRITDGMQRISIRHWNNQHQITKYSDNLGQT
WLFDWNDERQLLGATDPQGGRFEYSYDETGNLISEIDPLGRRDSTMWLEHWALPLVETNP
ANHSWRYQYDQRGNCIAATDPMGHITRYRYDSHGHPVEIIDATGKSKKLRWSPFGQLVEH
IDCSGYSTRFGYDERGFLQFITDALGERTQFSHDARGRLISSQLPDGRTEQYTRDTSGLL
LGYTDPAGHTTLYQHNRRGQVCQQTDAYGRRVKFAYDSYGRLKALINENEESYQFVWDAG
DRLTEQRDLDGSAKRYTYDLLNHMTAMTAVPAHFDNTLVNAAETPSPIVHRMERDAVGRL
IAKMTDDGRTEYVYDSLDQLCAVTFTDLSGDTQVLSFAYAPLGRLLTEQSPMGTLQHHYD
ELGNLTQTQLPDGRWLNRLYYGSGHLHQINLDGEVISDFERDRLHREVLRTQGQLSTRSE
YDRSGRLRSRHCRHSHQPMLTPAAMQQHFEYDPADNLTGKLDQQPTTQQRQLLHYDATGR
ITASQDNLLGQRETFTYDAAANLLDSPHPGAGLVVHNKLMTYQDKRYRYDGFGRMIEKRS
TSRGVQRFAYDAESRLIEVRNENGNVVKMHYDPLGRRIKKTEHGIDGYPLSETRFSWDGL
RLLQEHKYSQTSLYVYENEGYEPLARVDGIGQLQKLRYYHNDLNGLPAQLSEADGHIVWQ
ATYRVWGNTLEEVREPHYIEEQNLRFQGQYLDRETGLHYNTFRFYDPDIGRFTSPDPISL
MGGLNLYLYGFNPFSWVDPLGLEGIELGPGEQLGNPKDINFAQRTINSAFDTPEGKKPIQ
SVVNQVKKGKLKVTDFPPIEVVNVKGQLVARDGNSRLAIAVLGKAKQIKYKVITDPTLLR
DFNTRLRNNGLPNSGTSKVPTCKG
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgctctatgggctgcccggatgggcgatgcgctgacccacacctccatgatg
gccgacatcctcggcggtgtgctggaagtggcggccaacgtggcgattactgcgctggcg
actgctgctgtcgcggcggccgtgggggtgacgattgctaccgccggtatcggcggctgc
atcctcggcgcggtggtgggcattgtcgtcggcatggccatgagcaagacgggggccgac
aagggcctcagcaagatgtgcgagagcttcgccaacgcgctgttcccgcccgtggtggaa
gccacgattgcggtgggttcgaccgacactttcgtcaacagcattccggctgcacgggcc
gcaggctccattccctcgcacgtggcgcccgctggcacagagcttgagcaagtgccgccg
gagcccgaccccgagccacgacccgagcccggctttctggacatggccgagggtttcttc
tcccaactatggcgccccactgtcgccacgcctgcaccgggcgtggtaccggccctcacc
gacatggtcctgtgcgcccgccatccaccgatgccaccacagcttctggccgaagggtct
gacaaagtcaccatcaacggccagcccgccgtgcgcagtggcgaccgcagcatgtgcgat
gcgacggtggtgtcgtcggggctgatctcgccaaacgtcaccattggtggtgggacggtg
gtggtgcaggagattcgcagcgggaaaacccctggggtggggttggcgattgaagcgctg
atgatgctgaaaggtgccaaaggcaagacgctgagtaatttgccgtgcatgttgctcgcg
ggggtaacttcttatgccgtcagccaagcgatgggcgctgcagccaatgcgacgatgggg
tcacctaacccggtgcatgcggcaactggggccaaggtattgggtggcgagactgagctg
gattttgtattgcccggcatcctgccaatcgattggcaacgtttttataactcgcgagat
gagcgccgcaccgggatgtttggtgcaggctggagtgtcccgtacgagatcagcgtagag
atactgctacaccctgacggcggtgaagaattgctctacaccgacgagcaaggcaggcga
atcaaccttggcggtatatcacttggcagcgcgatgttcagtccgggagagggtttgagc
attcggcgacatcgcaatggtcagctgctgatcgaaagcgccgacggtatatatcgcttg
ttcgaatccactccggcaaacgtatcactgctacgccttactcagcttggtgaccgcaac
gaccatcgcatccacctcaactacgacgccgccgggcgtttggtgcagttgcacgacaac
cttgatctggtgcaggttgaattaatccgcgaccagggtcacgtgtccaagattgagcgt
gtttaccctgatcagcgtcgtgaagtgctcgtgagttacagttacaacgcaactggcgat
ctgacagaggtgcgcgatgccaccggtcagatacaacgacgcttcagttacgacgcaggc
aggcggatggtagagcaccaactgcctgccggactgcgctgtttttatgagtgggccttg
gttgaggacgtggaatggcgcgtatcacaccattggaccgatgaaggcgatgcttaccat
ttcgagtacgacctgagtgccggtatcacgcgcatcaccgacggcatgcagcgcatcagc
attcgtcattggaacaaccagcaccaaatcaccaagtacagcgacaatcttggccagacc
tggctgttcgactggaacgatgagcgccaattgctcggtgctaccgatcctcagggcggg
cgctttgaatatagctacgacgaaaccggtaacctcatcagtgaaatcgacccgctgggc
cgtcgcgattcgacgatgtggctcgaacactgggcattacctctggttgagaccaacccc
gccaaccacagctggcgctatcaatacgatcagcgcggtaactgcatcgccgccaccgac
ccgatgggccacattacccgttatcgctacgacagccacggccaccccgtggaaatcatc
gacgctaccggcaaaagcaaaaagctgcgctggagtccgtttgggcaattggtcgaacac
atcgattgctcgggttattcgacgcgattcggttacgacgagcggggatttttacagttc
atcactgatgcgctcggagaacgtactcagttcagccatgacgcccgtgggcggctgatc
agcagccaattgcctgacgggcgaaccgaacagtacacacgtgataccagtggcctattg
ctgggttacaccgacccggcagggcacaccacgttgtatcaacacaataggcgtggccag
gtgtgtcagcaaacggatgcctatggccgacgggtgaagttcgcttatgacagctatgga
cggctgaaagccctgatcaacgagaatgaagaaagctaccagtttgtctgggacgccggg
gatcgcttgaccgaacagcgagacctcgatggcagcgccaagcgctacacctatgatctg
ctgaaccacatgactgcaatgacggccgttcccgcgcatttcgacaatactctggtcaac
gctgccgagacgccgtcacctatcgttcaccggatggaacgcgacgctgttggccgactg
attgcaaaaatgaccgatgatggccgcaccgaatacgtttacgattcgctggaccagctc
tgcgccgtcacctttaccgatctgtcgggcgatacccaagtcctgagtttcgcatacgct
cctctcggccggttattgaccgaacaaagccctatgggcaccttgcaacatcactatgac
gaactcggcaatctaacccagacccaactgcctgacggccgctggcttaataggctgtat
tacggcagcggccacttgcatcagatcaatctggacggagaagttatcagcgacttcgag
cgcgaccgccttcatcgtgaagtgctacgtactcaaggccagctcagcacacgtagcgaa
tacgaccggagcggtcgcctgcgttcacgccattgccgtcatagccaccagcccatgctg
acgccggcggcaatgcaacagcacttcgaatacgaccccgctgacaatttgaccggcaaa
ctcgatcagcaaccaacgacccagcagcgccagctgttgcactacgacgctaccggccgc
atcactgccagccaggataacctgctgggccagcgcgaaacctttacttacgacgccgcc
gccaacctgctggacagtccgcaccccggagcgggcctagtagtacataacaagctgatg
acctatcaggacaagcgctaccgttatgacggcttcggacgcatgatcgaaaaacgcagc
acctcccgaggcgtacaacgatttgcctacgatgcagaaagccgactgattgaagtccgc
aatgaaaacggcaacgtggtgaaaatgcactatgacccactgggccgacgcatcaaaaaa
acggaacacggtattgatggttacccactgagtgaaactcgtttttcctgggacggcttg
cgtctcttgcaggaacacaaatacagccagaccagcctatacgtgtacgaaaatgagggc
tatgaacccctggcccgcgtagatggcattggacaactgcagaaattgcgttattaccat
aacgatctcaacggccttccggcacaactcagcgaagctgacggccacatcgtctggcag
gcaacgtaccgggtgtggggcaacacgctggaggaagtgcgagaacctcattacattgaa
gaacagaacctgcgattccaggggcagtatctggatcgagaaacagggctgcactacaac
actttcagattctacgatccggatatagggcgctttacatcccctgacccgatcagcttg
atgggaggactgaatctctacttatacggcttcaaccctttcagctgggttgacccgctt
ggcctggaaggcattgagctgggcccaggtgagcaattaggaaacccgaaggacatcaac
tttgcccagcgaaccatcaatagcgcgttcgatactcccgaaggaaaaaaacctatccaa
tctgtcgtcaaccaagttaaaaagggcaaactgaaagttaccgatttcccaccaattgaa
gtggtgaatgtcaaaggccagcttgtcgcacgggatggcaacagccgcctggcgattgct
gtgctgggcaaggcaaaacaaattaagtacaaggtcattaccgaccctaccctgctacgc
gactttaatacccgactcaggaataatggcttgccaaatagcggtacgtccaaagtacca
acatgcaaaggataa
DBGET
integrated database retrieval system
