KEGG   Pestalotiopsis fici: PFICI_12133
Entry
PFICI_12133       CDS       T04924                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03030  DNA replication
pfy03410  Base excision repair
pfy03420  Nucleotide excision repair
pfy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFICI_12133
   03410 Base excision repair
    PFICI_12133
   03420 Nucleotide excision repair
    PFICI_12133
   03430 Mismatch repair
    PFICI_12133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfy03032]
    PFICI_12133
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_12133
Enzymes [BR:pfy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PFICI_12133
    6.5.1.6  DNA ligase (ATP or NAD+)
     PFICI_12133
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PFICI_12133
DNA replication proteins [BR:pfy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PFICI_12133
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PFICI_12133
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PFICI_12133
   NER (nucleotide excision repair)
    Other NER factors
     PFICI_12133
   MMR (mismatch excision repair)
    Other MMR factors
     PFICI_12133
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 19277146
NCBI-ProteinID: XP_007838905
UniProt: W3WV80
LinkDB
Position
Unknown
AA seq 891 aa
MAPKQATLGKFFGNPNGSKPAAAKQQSKLSFSTKSAAKKTEEDESEETEKNGASSSSTES
PGPKSKVKPDPEAKENAAPADSKKRDRASLSPKNKVKKSPVKVKSEEVDEDEEDVPVSKR
ARRSRRTVEEDEEDEVMADAEPAKPIKSPKTKKAAPKKQAAVASKTKAKPEPVEDDASAK
EEASAAESASEVEDVDEEDEKPEVAKKAREKVQTKLKSKVKDPYPDWKEGSPVPYAALCT
TFSLIELTTKRLEITEHCALFLRQVLRLTPDDFLPVVNLMINKLAPDYAGIELGIGESLI
MKAIGETTGRSLQVIKADQKDIGDLGLVAVKSRSTQPTMFKPKPLTVRGVHKGLMDIATV
AGNGAQGRKVDGIKKLLSSADAHSTGKVDIYKDKGGPSEAKYLIRFLEGKLRLGLAEKTV
LVSVAQAMIIHEFEKKGKVPSTTDMEQAEQALKTTYSELPTWDVIIPAMLRNGIMNLRET
CKLRPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIHYVAKEHKDEYIDGV
PGATKEAAKGIASIFSRNSEDLSKKYPDILAKLNTWVKDGTKSFVLDCETVAWDVNEKKV
LPFQQLMTRKKKDVKIEDVKIKVCVFAFDLLFLNGEAVVEKPLRERRELLHKSFQPVEGE
FAFATSMDGQELEEIQQFLDDSVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLS
GVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPGTDTYETVCNIGTGFSEQVLEDLHKS
LSEIVIDRPKPFYSHSSGGQHQPDVWFEPKYVWEVKTADLTLSPRYKAGWKEGVDPGGEK
GISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQEAVTKNKGPSVDDDFEY
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggcgcccaaacaggcaaccttaggcaagttctttggaaacccaaacggttcgaaaccc
gccgccgcaaagcaacaatcaaagctctcttttagcacaaaatcagctgccaaaaagaca
gaagaggacgaaagcgaagagacggaaaagaatggtgcctccagcagtagcaccgagtct
cccgggcccaagtccaaagtcaaacctgatcccgaagccaaggagaatgcagcgcctgcc
gattcaaagaagcgagaccgggctagcttgtcgccaaagaacaaagtaaaaaaatcaccg
gtcaaagtcaagtctgaagaggtcgatgaagacgaggaagatgttccagtgtcaaaaaga
gcgcgcaggagtcgtaggacggtagaggaggacgaggaagatgaggtcatggctgatgcc
gaacctgcaaagccgatcaagtcaccaaagactaagaaggcagcgcccaagaagcaggca
gctgtggcttccaaaaccaaggccaagcccgagccagtagaggatgatgcctcagccaag
gaagaggcgagcgccgctgaatctgcttcagaagtggaagacgtcgacgaagaggatgag
aaacccgaggttgcgaaaaaggccagagaaaaggtgcagaccaaactcaagtccaaggtt
aaggatccatatcccgactggaaagaaggatcgccagtgccgtacgctgcgctttgcacc
acattctctctgattgagctcacgaccaaacgtctggaaatcactgagcactgcgcactt
ttcctgcgtcaagttcttcgcctgacgcccgatgactttctccctgtggttaatctgatg
atcaacaaattagcacccgattatgctggtattgagctgggaatcggcgaatctctgatc
atgaaagccattggcgagaccactggacgaagcttgcaagtcatcaaggccgatcaaaaa
gatattggtgatctcggtctggtggccgtcaagtctcgatcgacgcagcccaccatgttc
aagccaaagcccttgaccgtacgaggtgtacacaagggtctcatggacattgccacggtg
gctggcaatggtgcgcagggacggaaagtcgatggtatcaagaagcttttgtcctctgcc
gacgcccactctacgggcaaggtggatatatacaaggacaagggtggcccaagtgaagcc
aagtacttgattcggtttttggagggcaagctacgactgggtctagcagaaaagactgtc
ctggtctcagtggcgcaggccatgatcatccatgagtttgaaaagaagggcaaggtgccc
agcacaaccgacatggagcaggctgagcaggctctcaagacgacttatagcgagcttccc
acttgggatgtcattatccccgcaatgctcaggaatggcattatgaatctgagggaaacg
tgcaaactccgaccaggtgtcccattgaagcctatgcttgccaagcctaccaaagccatc
accgaagttttagatcgtttcgagaaccagacttttacttgcgagtacaagtatgacggc
gaaagagctcaaattcactatgttgccaaagagcacaaggacgaatatattgacggtgta
cctggtgcaacaaaagaggctgcaaagggtattgcctccattttctcgagaaattccgaa
gacttgtcaaaaaagtatccagatatcttggccaagctcaacacttgggtcaaggacggc
acgaaaagctttgtcctggactgtgaaacagtcgcttgggatgtcaacgagaagaaagtc
ttgccatttcaacaactcatgacgaggaaaaagaaggatgtcaagattgaagacgtcaag
atcaaggtctgcgtgtttgctttcgatctgctcttcctcaacggcgaagctgtagtagaa
aagcctctgcgtgaacgtcgcgagctactccacaagtccttccagcctgtcgaaggagaa
ttcgcctttgccacgagcatggatggccaagaactggaagaaattcaacaattcctcgat
gacagtgtcaaggcttcttgcgagggtctcatggtaaagatgctggacggcaccgagagt
ggatatgagcccagcaaacgcagtcgcaattggctgaagatcaagaaggattacctttct
ggtgtcggcgattccctggatcttgtcgtgctgggcgcttattacggcaagggcaaacgt
acttctgtgtacggtgccttcttgcttgcatgttacaatccaggtactgatacgtacgag
acggtttgcaatattggcactggcttctctgaacaagtcctcgaggacctgcataaatcg
ctatcggagattgttattgaccgcccgaagcctttctactcccattccagcggtggtcaa
catcaaccggatgtctggtttgagcctaaatatgtctgggaggtcaagacggcagatctc
accttgagtcccaggtacaaggcaggctggaaggaaggtgttgatcccggcggtgagaag
ggtatcagtctgcgtttcccgagattcatcaagatcagagacgacaagaagccggacgag
gccacgagcagcagacaagtggcagagatgtacagaaaacaagaggccgtcaccaagaac
aagggccccagtgttgacgatgatttcgagtactag

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