Pseudomonas fragi: AV641_11030
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Entry
AV641_11030 CDS
T04285
Name
(GenBank) peptide ABC transporter
KO
K02033
peptide/nickel transport system permease protein
Organism
pfz
Pseudomonas fragi
Pathway
pfz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV641_11030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_11030
Transporters [BR:
pfz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AV641_11030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
AMB79560
LinkDB
All DBs
Position
2444408..2445349
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AA seq
313 aa
AA seq
DB search
MFRFILHRLGMAVPTLLLISVIVFALIRLIPGDPALLMLGDMADPQSLADMRSSLGLDHS
VVSQYLIWIKSVLSGDLGVSISSRQPVLELLVERFSVSATVVLVSVLLATLLAVPVGLLA
AWKQNSVMDLGLVATATLLLSVPSFWLGLLLLYVFGIQLGWLPVIGYVGFASDPLKAVTY
VVLPIITLTLVEFGAIARMARASTIEVLRLEYIAHARAKGLSESAVLWRHALRNAFAPTW
TLIGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFSRDYPVLQGCLLLITCIYVLVNLLV
DLLYPLFDPRVKL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgattcatattgcacaggctcggcatggcagtgccgaccctgttgctgatctcg
gtgattgtatttgccttgatccgcctgattcccggcgacccggcattgctgatgctcggc
gacatggccgacccgcaaagcctggccgacatgcgcagcagcctgggtctggatcactcg
gtggtgagccagtacctgatctggatcaagtcggtgctcagtggtgatctcggggtgtcc
atcagcagccgccagccagtgctggaattgctggtcgagcgtttcagtgtcagcgccacg
gtggtgctggtttcggtgttactggcgaccttgctcgcggtgccggtgggcttgctcgcg
gcctggaagcaaaacagcgtgatggacctgggcctggtggcaactgcgaccctgctgctg
tcggtgcccagtttctggctgggattgctgctgctgtatgtcttcggcattcagttgggc
tggctgccggtgatcggttacgtcggcttcgccagcgacccgctgaaggctgtgacctat
gtggtgctgccgatcatcaccctgaccctggtggagttcggtgccattgcgcggatggca
cgggccagcaccattgaagtgctacgcctggagtacatcgcccatgcccgggccaagggc
ttgtccgagagtgcggtgttgtggaggcacgccttgcgtaatgcctttgcgccgacctgg
acgctgatcggtctgattcttggcaatctgctgggcggcattgcggtactggagacggtg
ttcaccttgccggggatcggccggctgatggtggatgcgatcttctcccgcgactatccg
gtgctgcagggctgcctgctgctgatcacttgcatctacgtgttggtcaacctgttggtg
gatctgctgtatccgttgttcgatccaagggtgaagctatga
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