Phaeobacter inhibens DSM 17395: PGA1_65p00250
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Entry
PGA1_65p00250 CDS
T02192
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00521
Streptomycin biosynthesis
pga00523
Polyketide sugar unit biosynthesis
pga00541
O-Antigen nucleotide sugar biosynthesis
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01250
Biosynthesis of nucleotide sugars
Module
pga_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PGA1_65p00250 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PGA1_65p00250 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PGA1_65p00250 (rfbC)
Enzymes [BR:
pga01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PGA1_65p00250 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AFO93607
UniProt:
A0AA85ZF89
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All DBs
Position
pPGA1_65:complement(31810..32445)
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AA seq
211 aa
AA seq
DB search
MCLSRGVTRVWALGQKTGPRQQIGGEGMQIEDTDLPGVKILTPARFGDARGFFCESWNKA
RMAEAGLDFDFVQDNHSLSMEVGTLRGLHFQAPPHAQAKLVRCGQGALFDVAVDIRKGSP
TYGRWTGVELSAANGRQLLIPAGFLHGFITCSPGTEVLYKCDAYYAPDCDGGVAWDSCGI
DWGFDGTPVLSEKDARAPRFEDFDSPFVWEG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctttcccgtggcgtcacgcgcgtctgggcgttaggacagaagacaggaccacgg
cagcagatcgggggagagggcatgcagattgaagacacggacctgccaggggtgaagatc
ctgacaccggcgcggtttggcgatgcgcgggggtttttctgcgagagctggaacaaggcg
cggatggccgaggcggggctggatttcgatttcgtgcaggacaatcattcgctgtcgatg
gaggttggcaccctgcgtgggctgcattttcaggcgccaccccatgcccaggccaagctg
gtgcgctgcggccagggggcgctgtttgatgtggcggtggatatccgcaaaggctcgccc
acatacgggcgctggaccggggtggagctgtcggcggcaaacggccgccagctgctgatc
ccggcggggttcctgcatgggttcatcacctgcagccccggcaccgaagtcctgtataaa
tgcgatgcgtattacgcgccggactgtgacggcggggtggcctgggacagctgcggtatt
gactggggctttgacggtacaccggttctttctgaaaaggacgccagggcgccccggttt
gaagacttcgacagccccttcgtgtgggaaggataa
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