Phaeobacter inhibens DSM 17395: PGA1_78p00320
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Entry
PGA1_78p00320 CDS
T02192
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K21826
AraC family transcriptional regulator, glycine betaine-responsive activator
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pga03000
]
PGA1_78p00320
Transcription factors [BR:
pga03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PGA1_78p00320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_AsnC-type
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AFO93553
UniProt:
A0AA86DDS5
LinkDB
All DBs
Position
pPGA1_78:39674..40717
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AA seq
347 aa
AA seq
DB search
MTIHSPHHRDTDFAFAQGRALRHIDVVLPEGAPRSSAQIILDLFEAANELLDGVQYRVRV
CGLDMLSSGPAGARPRSLVVFLGDIHSRWQLSAKERARVNQVMRLAERSAFVGGAVFLLD
ALARGQDHDLAIHPNFLASAGECSLRQDQDGAATAVSGTVHSAICNFATPRMLLDIVAAD
CGRLAADGMAHYLGLDTGKRPTKSRVALNLEQKSAGDTLITQCLAVMQDNIEAPLSVAAL
AESLNVSTRCLQRRFTRHFDRSPLSVYRALRVERAHQLLTQTDIPVRQVAVATGFGSYQS
LSQHIRETYGHSPDVIRRSAFRGVAPETMRPRRFRHAETAQADSRVM
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccactccccgcaccaccgcgacaccgattttgcctttgcccaaggccgcgcc
ctgcgccatatcgatgtcgtccttcccgagggcgcgccgcgttcctccgcccagatcatc
ctggatctgttcgaggcagcaaatgagctgctggacggggtgcaataccgggtgcgtgtc
tgtggtctggatatgctctccagtggtccagccggtgcccgaccccgctctctcgtggtc
tttctcggcgatattcacagccgctggcagctgtccgccaaggagcgcgcccgcgtcaat
caggtgatgcgactggccgaacgcagcgcctttgttggtggcgcggtgttcctgctggat
gcactggcccgaggtcaggatcacgatctggcaatccacccgaatttccttgcctcagcc
ggggaatgcagcctgcgtcaggatcaggacggcgccgcaaccgctgtctccggcacggtg
cattcggcgatctgcaatttcgctaccccgcggatgctgctggatatcgttgccgccgat
tgcggacggctggccgctgatggcatggcgcattaccttggccttgataccggcaaacgc
ccaaccaaaagccgcgttgccctcaaccttgaacagaaatccgcaggcgatacgctgatc
acccaatgtcttgcggtgatgcaggacaacattgaggcgccgctttcggtcgctgccttg
gccgagagcctcaatgtctccacccgctgcctgcagcgccggtttacccggcatttcgac
cgctcaccgctcagcgtttatcgcgcgctgcgggtggagcgcgcccatcagctgctgacc
cagaccgatattccggtgcgccaggtcgcggtcgccaccgggtttggcagctatcagagc
ctcagccagcacatccgcgaaacctatggtcattcccccgatgtgatccgccgcagcgcc
tttcgcggcgtggcccccgaaaccatgcgcccgcgccggtttcgtcacgccgagaccgcg
caggcggacagccgggtgatgtaa
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