Phaeobacter inhibens DSM 17395: PGA1_c01950
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Entry
PGA1_c01950 CDS
T02192
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pga03009
]
PGA1_c01950 (rluC)
Enzymes [BR:
pga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PGA1_c01950 (rluC)
Ribosome biogenesis [BR:
pga03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PGA1_c01950 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AFO89938
UniProt:
A0AA86DAA4
LinkDB
All DBs
Position
177932..178963
Genome browser
AA seq
343 aa
AA seq
DB search
MITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVP
PLGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGL
SAALQFDAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPT
PYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWVA
MEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRMA
FEHPTTKKPLSITAPLPDHMKDSWDTFGWSEDLAAEDPFESLQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgtcagtgaagacgacgcagaccagcgtattgaccgctggctgcggcggttg
ttcccgcatgtgagccaggggcggatcgagaagatgtgccgcaagggcgaattgcgtctg
gatgggggacgggtgaaggccaacagccgcgtcgcagccgggcaggtggtgcgcgtgccg
ccgcttggggcaagcgacctgaaaccggcagaggcaccgagctaccggatttccgaagcg
gacgccaagatgatccggggctgtgtgatctacaaggacgatgcggttatcgtgctgaac
aagccggcaggtctggcggtgcagggcggcagcggcaccaccaaacatgtcgacgggctg
agtgctgccttgcagttcgacgccgaggaaaagccgcgtctggtgcatcgtctggacaag
gacacctcaggtgtgttggtgctggcgcgcacccgtctggcggcgcagtcgctgacggcg
gcgttccggcatcgtgccacgcgcaagatctactgggcgctggtggcgggcgttcctacg
ccctatctcggtgagatcaaatgtgggctggtgaaggcaccgggacacggtaaatcgggg
gaaggcgagaaaatgatcgccatccattccaacgaggtggacagcacacccggggccaaa
cgctcgcatacgcattatgccacgctctaccgcgtggctagccgcgcggcctgggttgca
atggagccgatcaccggccgcacccatcagctacgcgcgcatatggctgaaatcggtcat
ccgattgctggtgacggcaaatacggcggctccagtcaggaaaacctcggcgatggctgg
ggggcgcagttgggggggattatctccaagaagctgcatctgcactgccgtcgcatggcg
tttgagcatccgaccacgaaaaaaccgctgtcgatcacggcgcccttgcctgaccacatg
aaggacagctgggacacctttggctggtccgaagatctggcggcagaagatccgtttgag
agcctgcagtaa
DBGET
integrated database retrieval system
