Plasmodium gaboni: PGSY75_0508700
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Entry
PGSY75_0508700 CDS
T08136
Name
(RefSeq) putative pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pgab
Plasmodium gaboni
Pathway
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_0508700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgab03041
]
PGSY75_0508700
Enzymes [BR:
pgab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PGSY75_0508700
Spliceosome [BR:
pgab03041
]
Complex A
U2 snRNP components
U2 related factors
PGSY75_0508700
Complex B
PGSY75_0508700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
29774979
NCBI-ProteinID:
XP_018643024
UniProt:
A0A151LSX3
LinkDB
All DBs
Position
5:285968..290485
Genome browser
AA seq
1505 aa
AA seq
DB search
MYNILNYIYKDNKEEKKNDKDKDVDVKIKKHDSDDSDDALKKDNRSNSKKKDVDKNTYYD
NSYNNEEEDRRKKKRDSRKYSVDDSYNKIKNKIYNDHKTDEYDSYAYKKKSSYHHINREK
YLDEKKKKYYERRDKKSKRRSYDYSSNYDESDDSNRSGYYNERSKKYYKYQDKKKKEKKR
KRRYHHTDDYDDDDHLESSSSSSSSSKGSINVREKQKHKKIYSYEKERKRKKRDSNSSSY
SSYDEDTKERDKKRKSYHHDYIKDDKKKKNYHKYESNEVNNNNNNNNNNNNNNNNNKDMS
NEDINEPHETHETPININNMSKENQRICEENKIEKEIEKISDVKEITTTENNNLSRLERL
KLFARKIKKTNETTNEKTNETTNEKHTKFTLNTKVNKITNLNIFMNDEDDEIDNSREKIF
DMKNENNLSEQNVDDNNYKVDIKKKKEEKNKNQINQNHKMKEKKKIKNNNNNSSSSYDDN
GDDLLLVQNNNTNEDALDLYMKDIEEAWEEENKNVKQTITLDEIYTYDMNKHKYEHYINP
KNNEEKKDNVEKENIYNNNNNVNTQEDVENIYKKNNKKTITNNNYCDEYTHCDDEDTFHK
LFVEELKKKTEEDMKRNEKDNMNEFNLRDSKNKKMNKELSVSFDSSDDTDNREDTVSSNK
SELNYEENGMKKMNKKILEVNHDEIDYVPIKKNIYVQVKEITNMKDSDVEMFRKNNGNII
VRGKNCPRPIQYFYQCGLPSKILQILERKNFKKMYNIQMQTIPALMCGRDVIAIAETGSG
KTLSYLFPLIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVDIDILAVYG
GSNISRQLKRLKKGVEILVGTPGRIIDILTVSNCKVTNLNRVSFVVLDEADRLLDLGFES
QIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIYQFVEIIE
ESKKVFRLLKLLGEWINYGLILIFVNKQIEADLLYLELYKYDYNLLVLHGGQNQTDRQYT
LEKFKKEENKILIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIGRTGRSNNIGYAYT
FILPDEYSKAYDIYNLLKNNIYYLNKTIDIPQDLENMIIEYANINSINDKQKTKYKNLGY
KGKGYKFTPDEKSRQQIDIALAKKELGYTQENDDKENIQIDDELVDNLEHNNNIDSNENN
LEHNKNFNNSQDNKDSKNLYTQHNIHNNITFEDKNFGGSKNMNKKNNTNDKKNTNDKKNT
NNQFTDISKVEQEIQRIKMNDTMELSLKAKKINELMKTYNFLTLQENHDKILKNAQYEEF
DRIAEKEALKATEHILDEKEKKLIFNKTKEDIKNKLIQNKIQSDTMNQSIQRNMLLSALR
TKNMKKYSPYLPHTYITEDNNILEEFYINNYPQHVRLKISHKDVLAKIADMSGATCQIKG
QYSNPSQPNKQNFLLDTKQLHIEIIAHTYNQIQIARNELNSLLNTFMLSCNIKGKRASTA
WAPPQ
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatattttgaactacatatataaagataataaagaagaaaagaagaatgacaaa
gataaggatgtggatgtaaaaataaaaaaacatgattctgatgatagtgatgatgcatta
aaaaaagataacagaagtaatagtaaaaaaaaagatgttgataagaacacatattatgat
aatagttataataatgaagaggaagataggagaaaaaaaaaaagggattctagaaaatat
agtgtggatgattcttataataaaataaaaaataaaatatataatgatcataaaacagat
gaatatgattcctatgcatataagaaaaaatcatcctatcatcatattaatcgtgaaaaa
tatctagacgaaaaaaaaaagaaatattatgaacgtagagataaaaaaagtaaaagaaga
agttatgattattcttctaattatgatgaaagtgatgatagtaacagatctggttattat
aatgaaagaagcaaaaaatattataaatatcaagataaaaagaaaaaagaaaagaaaaga
aaaagaagatatcaccatacagatgattatgacgatgacgatcatcttgaaagttcttca
agtagtagttcttctagtaagggttcaataaatgtaagagaaaaacaaaaacataaaaaa
atatattcatatgaaaaagaaagaaaaagaaaaaaaagagatagtaatagtagtagttat
agtagttatgatgaggatacaaaagaacgtgataagaagagaaaatcatatcatcatgat
tatataaaggatgataaaaaaaaaaaaaattatcataaatatgaatcgaatgaagttaac
aacaacaacaacaacaacaacaacaacaataataataataataataataaagatatgtca
aatgaagatatcaacgaaccacatgaaacacacgaaacacctatcaatattaataacatg
tcaaaagaaaaccaaagaatatgtgaagaaaataaaattgaaaaggaaatagagaaaata
tctgatgtaaaagaaattacaactacagaaaataataatttaagcagattagaaagatta
aaattatttgctcgaaaaataaaaaaaacaaatgagacaacaaatgagaaaacaaatgag
acaacaaatgaaaaacatactaaatttactttaaatactaaggtgaataaaataacgaat
ctaaatatatttatgaatgacgaagatgatgagattgataattcaagagaaaaaatattt
gacatgaaaaatgaaaacaacttaagtgaacaaaatgtggatgacaataattataaagtt
gatataaaaaaaaaaaaagaggaaaaaaataaaaaccaaataaatcaaaatcataaaatg
aaggaaaaaaaaaaaataaaaaataataataataatagtagtagtagttatgatgataat
ggtgatgatttacttcttgttcaaaataataataccaatgaagatgctctggatctttat
atgaaagatatagaagaagcatgggaagaagaaaataaaaatgtaaagcaaactataacg
ttagatgaaatatatacatatgatatgaataaacataaatatgaacattatattaaccct
aaaaataatgaagaaaaaaaagataatgttgaaaaagaaaatatttataataataataat
aatgtgaatacacaagaagatgtagaaaatatatataagaagaataataagaagactatt
acaaataataattattgtgatgaatatactcattgtgatgatgaagacacgtttcacaaa
ttatttgtagaagaacttaaaaaaaaaacagaagaagatatgaaaagaaatgaaaaggat
aatatgaatgaatttaatttaagagattcaaaaaataaaaaaatgaataaagaattaagt
gtatcatttgatagttcagatgatacagataatagagaggatactgtaagtagtaataaa
agtgaattaaattatgaagagaatggtatgaaaaaaatgaataagaaaatattagaagta
aatcatgatgaaatagattatgtacctattaaaaaaaatatatatgtacaggttaaagaa
ataacaaatatgaaagatagtgatgttgaaatgtttagaaaaaataatggaaatataata
gttcgaggaaaaaattgtccacgtccaatacaatatttttatcaatgtggattaccatca
aaaatattacaaatattagaaagaaaaaattttaaaaaaatgtataatatacaaatgcaa
acaatacctgcattaatgtgtggacgtgatgttatagctatagctgaaactggaagtgga
aaaacattatcatatttattccctttaattagacatgtattacatcaagaacctttaaga
aataatgatggaccaatatcaattattttaactcctacaagagaattaagtatacaagta
aaaaacgaggcgaaaatatattgtaaagctgtagatatagatatattagctgtttatggt
ggttcaaatatatctagacaattaaagagattaaaaaaaggagtagaaatattagttgga
acacctggacgtataatcgatatattaactgtaagtaattgtaaagttaccaatttaaat
cgtgtatcctttgttgttttagatgaagctgatagattattagatttaggatttgaatca
caaatatataatattttaagaaattgtagaaaagacaaacagacagctatgatttcagct
acgtttccaaattatatacaaaatatggcaaagaaattattatataaaccgatagaaata
attgtaggagaaaaaggaaaaacaaataataatatatatcaatttgttgaaataattgaa
gaatcaaaaaaagtatttcgcttattaaaacttttaggagaatggataaattatggatta
atattaatatttgtaaataaacaaatagaagcagatttattatatttagaattatataaa
tatgattataatttattagtattacatggaggacagaatcaaacagatcgtcaatatact
ttagaaaaatttaaaaaagaagaaaataaaatcttaatagctacatctgttatggctaga
ggtattgatattaaaaatattattctagtaattaattatcaatgtcctgatcatattgaa
gattatatacatcgtattggaagaactggaagatctaataatattggatatgcatataca
tttatattaccagatgaatattcaaaagcatatgatatatataatttattaaaaaataat
atatattatttaaataaaactatagatataccacaagatttagaaaatatgattattgaa
tatgccaatattaatagtattaatgataaacaaaaaacaaaatataaaaatcttggttat
aaaggtaaaggttataaatttactccagatgaaaaatctagacagcaaatagatatagca
ttagccaaaaaagaattaggatatacacaagaaaatgatgataaagaaaatatacaaata
gatgatgaacttgttgataatctagaacataacaataatattgattctaatgaaaacaat
ttggaacacaacaaaaattttaataattctcaagacaataaagattcaaaaaatttatat
acacaacataatattcataataatattacttttgaagataaaaattttggaggttctaaa
aatatgaacaaaaaaaataatacaaatgataagaaaaatacaaatgataagaaaaataca
aataatcaatttacagatatttcaaaggtcgaacaagaaatacaaagaatcaaaatgaat
gatacaatggaattatctttaaaagcaaaaaaaattaatgaattaatgaaaacttataat
ttcttaacacttcaagaaaatcatgataaaattttaaaaaatgcacaatatgaagaattt
gatagaatagctgaaaaagaagctttaaaagcaacagaacatatactagatgaaaaagaa
aaaaaattaatctttaataaaacaaaagaagatatcaaaaataaattaatacaaaataaa
atacaatcagatactatgaatcaaagtatacaaagaaatatgttattaagtgcattaaga
acaaaaaatatgaaaaaatattctccatatttaccacatacatatataacagaagataat
aatatattagaagaattctatattaataattatccacaacatgtacgtttaaaaatatca
cataaagatgtattagcaaaaatagctgatatgtcaggtgctacatgtcaaattaaagga
caatattctaatccttcacaaccaaataaacaaaatttcttattagatactaaacaatta
catatagaaattatagcacatacatataatcaaatccaaatagctagaaatgaactgaac
tcattattaaatacatttatgcttagttgtaatattaaaggtaaaagagcttcaaccgcc
tgggcaccaccccaataa
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