Plasmodium gaboni: PGSY75_1244200
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Entry
PGSY75_1244200 CDS
T08136
Name
(RefSeq) putative transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pgab
Plasmodium gaboni
Pathway
pgab03022
Basal transcription factors
pgab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PGSY75_1244200
09124 Replication and repair
03420 Nucleotide excision repair
PGSY75_1244200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgab03021
]
PGSY75_1244200
03400 DNA repair and recombination proteins [BR:
pgab03400
]
PGSY75_1244200
Transcription machinery [BR:
pgab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PGSY75_1244200
DNA repair and recombination proteins [BR:
pgab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PGSY75_1244200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
ACDC
Motif
Other DBs
NCBI-GeneID:
29777590
NCBI-ProteinID:
XP_018640863
UniProt:
A0A151LGY8
LinkDB
All DBs
Position
12:complement(1563933..1566704)
Genome browser
AA seq
923 aa
AA seq
DB search
MVKIRKNVENMEIYDYMKELNENVWCYFFDDSLAHETIYHSLNELEQIIISRLLFIQQVV
SERAMRLWINPNYLKKLSESIKNLVEAKILVESDMKKDNYNQYKINESFRITLLNKIYKT
NTNNIFIFNNNIKEQLEREKNLYEQNLFPHKEEIFGYAQTKWNNLLHFIASPNFNSVNNY
FNSNINNDDPNKYSSYDMTRRKRAGKDGGSDLGRKSFDKMASRRSYNRRRKKKRYSDDED
EFDEEEYEGEDDDNIVDGDDSDDSDGDDNDGDGNSDDNSDDHSDDDNNIDLNDEENSHPL
VKYQYENHQLNNSTPYVEKPSDDYTYKKEDENKIGQRKSVHFNTDMYEEQYNNSYTQQID
SNNVNEMDYYMTDSKTKNNKKKKKKNKHIYAYKQNELYYKSLLNMEHSYIEEENYNNNES
AFFLSNMNERFMTKPSESVIEVLRRKNFLLDDPNNTKTINMSREAFSWFLKDLRSRIISL
VLEYLLIIDNGYVTNIAKDVYTKYQKKKNNATNNITASSSSGINNNINFDENIKSNNGEE
SKKSYDNNSTTTTIKNNNNNNNNNSSSNSAYITRSNKDPKKSEIYVKETLLFILSLSQCD
ISHPIFLDNLTKAQKEFIDFGSHIGLFLKPNDTYIFITPYALLLTINNFNSQYYLSLLSN
ITIEGLCEEDVRKRLSERYFHFYLLKQDEKEEKYINKDLSSDIKNKDDMSLVLDKRKNIT
KKLINDSLYSDIKMNGSNNLEIGLIVQSNFKVYLYTSSLLKINILSHLCELQARTPNMVV
GILTRRSVLNAYNSDITANQIIKFLESYSHPGKNNFKSSIPMNVITQLKLWESERHRLTL
EDAIVFKSFEKDFMPHLYQQIVIWANSKNYLLYYTPWPKNNTKEFDIWIKAEKYLCCIYE
SKNEIIDKIKEIREKLMKKRQSG
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaataaggaagaatgttgaaaatatggaaatatacgattacatgaaggaactg
aatgaaaatgtgtggtgttatttttttgatgattctttagcacatgaaacaatatatcat
tcccttaatgaattagaacaaataattatttcaagattattatttatacagcaagtagtt
tcagaaagagctatgagattatggattaatccaaattatttaaaaaagttaagtgaaagt
ataaaaaatttagtagaagcaaaaatattagtagaaagtgatatgaaaaaagataattat
aatcaatataaaattaatgaaagttttagaattaccttattaaataaaatttataaaaca
aatacaaataatatctttatttttaataataatattaaagaacaattagaaagggaaaaa
aatttatacgaacagaatttatttcctcataaagaagaaatatttggttatgctcaaaca
aagtggaataatttattacattttatagcatctccaaattttaattctgtgaataattat
tttaattcaaatattaataatgacgatccaaataaatactcctcctatgatatgacaagg
cgtaaaagagcaggaaaagatggaggttcagatttgggaaggaaatcgttcgataaaatg
gctagtcgtcgatcttataataggagacgaaaaaagaaaagatatagtgatgacgaggat
gaatttgatgaggaggaatatgaaggggaagatgatgataatattgttgatggtgatgat
agtgatgatagtgatggtgatgataatgatggtgatggtaatagtgatgataatagtgat
gatcatagtgatgatgataataatattgatcttaacgatgaagaaaattctcacccactt
gtaaaatatcaatatgaaaatcatcaacttaataactcgactccttatgtcgaaaaacca
tcagatgattatacttacaaaaaagaagatgaaaacaaaatagggcaaagaaaaagtgta
cattttaatactgacatgtatgaagaacaatataacaattcatatacacaacaaatagat
agtaataatgtaaatgaaatggattattatatgactgatagtaaaacaaagaataataaa
aaaaagaaaaaaaaaaacaaacatatatatgcatataaacaaaatgaattgtattataag
agtttattaaatatggaacatagttatattgaagaagaaaattataataataatgaaagt
gcctttttcttgtcaaatatgaatgaaaggtttatgactaaacctagcgaaagtgttatt
gaagtgttaaggagaaaaaatttccttttagatgatcctaataatacaaaaactataaat
atgagtagagaagctttttcgtggtttttaaaagatttaaggagtagaataatatcctta
gtgcttgaatatttactaataatagataatggttatgtgacaaatatagctaaagatgta
tatacaaagtatcaaaagaagaaaaataatgctacaaataatattactgcaagtagtagt
agtggtataaataataatataaattttgatgaaaatattaaaagtaacaatggtgaagaa
tccaagaaaagttatgataataatagtactactactactattaaaaataataataataat
aataataataatagtagtagtaatagtgcatatataacaagaagtaataaagatccaaag
aaatcagaaatatatgtaaaagaaacgttattatttattttatcattatcacaatgtgat
ataagtcatccaatatttttagataatttaacaaaggctcaaaaagaattcatagatttt
ggtagtcatataggcctatttttaaaacctaatgatacatatatatttataacaccatat
gccttactattaacaattaataattttaattcacagtattatctatctctattaagtaat
ataactattgaagggttatgtgaagaagatgttaggaaaagattaagtgagagatatttt
catttttatttattaaaacaggatgaaaaagaagaaaaatatattaataaagatttatca
tcagatataaaaaataaagatgatatgtcattagtattagataaaagaaaaaatatcaca
aaaaaattaattaatgatagtttatattctgatataaaaatgaatggtagtaataatctt
gaaataggattaattgttcagagtaattttaaagtatatttatatacatcttctttatta
aaaattaatatattaagtcatttatgtgagttacaagcgcgtacaccaaatatggttgta
ggaattctaactagaagaagtgtattgaatgcatataattcagatattacagcaaatcaa
attattaaatttttagaatcttattcacatccaggaaaaaataattttaaaagctctata
cctatgaatgttattactcaattgaaattgtgggaatctgaaagacatagattaacattg
gaagatgctatagtttttaaatcttttgaaaaagattttatgccacacttatatcaacaa
atagttatatgggctaacagtaaaaattatttgttatactatacaccatggcctaaaaat
aatacaaaagaatttgatatatggataaaggcagaaaaatatctctgctgtatttatgaa
tcaaaaaatgaaattatagataaaattaaggaaatacgagaaaaacttatgaaaaaaaga
caaagcggataa
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